Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07209 ATGGAAGGAACTTTCAATTTCAACGATAATTCCTCTTCCGCTTTCAGCGACTGCGACAGTGACAGATCCACCGAATTCATCACTACAACAACTGAATCCAGAATCCAACGCCTTCTCATTACATGCGCTTCCGATGATTATTCCGACGAACTCATTCGCCGGTTGATTCTCGATCTCAATTCCTCTTCCATTGATCAACAAAAACAAGCTACGATGGAAATCAGATTACTTGCCAAAAACAAATCAGAAAATCGTCTCAGAATTGCAAAAGCCGGCGCTATCAAACCGTTGATTTCACTTTTATCATCACCGTCGCCGGTGATGGATCTTCAACTGCAAGAATATGTCGTCACAGCCATATTCAATCTCTCACTATGTGATGAAAATAAAGAGATTATCACTTCTTCTGGAGCGATTAAGCCAATGGTGAAAGCTTTGAAGACAGGTACTCCAACTGCCAAGGAGAATGCAGCATGTGCTCTGCTTCGTCTCTCGCAGACAGAAGAGAATAAAGGAACAATTGGAAGATGTGGAGCAATTCCGGCATTGGTGAACCTTCTAGAAAACGGAGGAATCCGCGGGAAAAAGGATGCGTCAACAGCGTTATACTCGCTGTGTTCGGTGAAGGAGAACAAAATCAGAGCAGTGAAAGCTGGAATTATGAAGCCTTTAGTTGAATTAATGGCGGATTTGGATTCGTACATGGTGGATAAGTCAGCGTATGTGATGAGCGTGTTGGTGACGGTTATGGAAGCTAGGACGGCGTTGGTGGAGGAAGGAGGAATTCCGGTGTTGGTGGAGATTGTGGAGGTTGGATCGCAGAGACAGAAGGAAATAGCGGTGGCGATTTTGTTGAAGATTTGTGAAGAGAATGTGAGTTATCGTGTAATGGTGTGTCGTGAAGGTGCTATTCCTCCTTTGGTTTCTCTTTCTCAGTCCGGTACCATTCGCGCCAAACACAAGGTGGAGACACTAATAGAGCTTCTACGGCAACCAAGATCTAGCAATGCCACTGCACGTGCCTCATAA 1029 0.449 MEGTFNFNDNSSSAFSDCDSDRSTEFITTTTESRIQRLLITCASDDYSDELIRRLILDLNSSSIDQQKQATMEIRLLAKNKSENRLRIAKAGAIKPLISLLSSPSPVMDLQLQEYVVTAIFNLSLCDENKEIITSSGAIKPMVKALKTGTPTAKENAACALLRLSQTEENKGTIGRCGAIPALVNLLENGGIRGKKDASTALYSLCSVKENKIRAVKAGIMKPLVELMADLDSYMVDKSAYVMSVLVTVMEARTALVEEGGIPVLVEIVEVGSQRQKEIAVAILLKICEENVSYRVMVCREGAIPPLVSLSQSGTIRAKHKVETLIELLRQPRSSNATARAS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07209 342 MobiDBLite consensus disorder prediction 1 20 - -
Mepo3g07209 342 Pfam Armadillo/beta-catenin-like repeat 82 124 IPR000225 GO:0005515
Mepo3g07209 342 Pfam Armadillo/beta-catenin-like repeat 127 165 IPR000225 GO:0005515
Mepo3g07209 342 Pfam Armadillo/beta-catenin-like repeat 168 207 IPR000225 GO:0005515
Mepo3g07209 342 FunFam RING-type E3 ubiquitin transferase 41 335 - -
Mepo3g07209 342 SMART arm_5 126 166 IPR000225 GO:0005515
Mepo3g07209 342 SMART arm_5 208 248 IPR000225 GO:0005515
Mepo3g07209 342 SMART arm_5 249 289 IPR000225 GO:0005515
Mepo3g07209 342 SMART arm_5 167 207 IPR000225 GO:0005515
Mepo3g07209 342 SMART arm_5 81 125 IPR000225 GO:0005515
Mepo3g07209 342 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 92 138 IPR000225 GO:0005515
Mepo3g07209 342 PANTHER U BOX DOMAIN-CONTAINING 52 330 - -
Mepo3g07209 342 Gene3D - 14 194 IPR011989 -
Mepo3g07209 342 Gene3D - 195 339 IPR011989 -
Mepo3g07209 342 SUPERFAMILY ARM repeat 46 331 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07209 Mepo-Chr3 85688910 85692606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07209 13 337 U-box Gene Family AT2G23140 45.045 1.11e-80 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00334 4 5149943 5152322 Mepo3g07209 3 85688910 85692606 PCT