Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07160 ATGGGTTCTAATTCTAATAGATCACCAATGTTATTGATCTTGATCTTGATCGTGTTCACCCTCTTCACATCAACATTTGCCTTGGATATGTCTATCATTTCCTATGACAAAACCCACGCAGCCAAATCTTCATGGCGTGGTGACGATGAAGTAAAGATTATATACGAGCAGTGGCGCGTGAAGCATGGAAAGCTCAATAACAACATAGACCAAAGCGAAAAGGATAAGAGATTTGAAATCTTCAAAGACAACCTTAAGTTCATCGACGAACACAATGCTCAGAACAGAACATACAAGGTTGGGTTGAACCGGTTCGCTGATCTTAGCAACGAAGAGTACCGGTTTAGGTACTTGGGAACCAAGATTGACCCAATTGGAATGATGATTGCAAGGAGCAATCGTTATGCTCCAAGTGTTGGTGACAAATTGCCCAAATCTGTTGATTGGAGGAGTCAAGGTGCTGTGGTCCAAGTCAAAGACCAAGGAAGTTGTGGGAGCTGCTGGGCATTTTCAACAATTGCTGCAGTAGAAGGGATTAACAAGATAGTCACAGGAGAACTTGTTTCACTATCAGAACAAGAACTGGTTGACTGTGACAGAACAGTTAATGCAGGTTGCGATGGCGGACTTATGGAATATGCCTTTGAGTTCATTATAAACAATGGTGGTATTGACAGCGATGAGGATTATCCCTATCGTGGCGTTGATGGTAAATGTGATCAATACAAGAAAAATGCTAGAGTTGTTTCAATTGATGACTACGAACAGGTTCCTGCCTATGATGAGTTAGCCTTGCAAAAGGCTGTGGCTAATCAGCCAATCAGTGTTGCCATTGAAGCTGGTGGTAGGGAATTCCAGTTATATGTATCCGGTATATTCACAGGAAAATGTGGGACAGCATTAGACCATGGTGTTACCGCTGTTGGGTATGGAACAGAAAATGGAGTTGATTATTGGATAGTAAGGAATTCATGGGGTAAGAGCTGGGGAGAATCAGGCTATGTAAGAATGGAACGTAATCTAGCAACAAGCGTGGCAGGCAAATGTGGAATCGCAATGCAGTCTTCCTATCCCATAAAGAAGGGACAAAATCCCCCAAATCCTGGACCATCTCCTCCTTCACCTGTGAACCCACCAACCGCTTGTAGTAGATATCACAGTTGTGCTTCAAGCACTACTTGTTGTTGTGTATTTGGAATTGGAAAATTGTGCTTTTCATGGGGATGTTGTCCTCTCAAGGCTGCAGTCTGCTGTAAAGATCACTCAAGTTGTTGTCCTCATGACTATCCCATTTGCAACATTCACCAAGGGACCTGTCTCAGGAGTAAGGATAATCCATTTGGAGTGAAGGCAATGAAGAGAACTCCGGCTAAACTGCACTGGCCTTTTGGAGATCAGAACAAGATAAACGTTGTTTAA 1419 0.4292 MGSNSNRSPMLLILILIVFTLFTSTFALDMSIISYDKTHAAKSSWRGDDEVKIIYEQWRVKHGKLNNNIDQSEKDKRFEIFKDNLKFIDEHNAQNRTYKVGLNRFADLSNEEYRFRYLGTKIDPIGMMIARSNRYAPSVGDKLPKSVDWRSQGAVVQVKDQGSCGSCWAFSTIAAVEGINKIVTGELVSLSEQELVDCDRTVNAGCDGGLMEYAFEFIINNGGIDSDEDYPYRGVDGKCDQYKKNARVVSIDDYEQVPAYDELALQKAVANQPISVAIEAGGREFQLYVSGIFTGKCGTALDHGVTAVGYGTENGVDYWIVRNSWGKSWGESGYVRMERNLATSVAGKCGIAMQSSYPIKKGQNPPNPGPSPPSPVNPPTACSRYHSCASSTTCCCVFGIGKLCFSWGCCPLKAAVCCKDHSSCCPHDYPICNIHQGTCLRSKDNPFGVKAMKRTPAKLHWPFGDQNKINVV 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07160 472 SMART pept_c1 143 359 IPR000668 GO:0006508|GO:0008234
Mepo3g07160 472 SUPERFAMILY Granulin repeat 379 412 - -
Mepo3g07160 472 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 301 311 IPR025660 -
Mepo3g07160 472 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 318 337 IPR025661 -
Mepo3g07160 472 Gene3D Cysteine proteinases 27 361 - -
Mepo3g07160 472 FunFam Cysteine protease 1 31 361 - -
Mepo3g07160 472 PRINTS Papain cysteine protease (C1) family signature 303 313 IPR000668 GO:0006508|GO:0008234
Mepo3g07160 472 PRINTS Papain cysteine protease (C1) family signature 161 176 IPR000668 GO:0006508|GO:0008234
Mepo3g07160 472 PRINTS Papain cysteine protease (C1) family signature 318 324 IPR000668 GO:0006508|GO:0008234
Mepo3g07160 472 SMART Inhibitor_I29_2 55 113 IPR013201 -
Mepo3g07160 472 Pfam Granulin 393 440 IPR000118 -
Mepo3g07160 472 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 49 357 IPR013128 GO:0008234
Mepo3g07160 472 FunFam Cysteine protease 1 379 442 - -
Mepo3g07160 472 CDD Peptidase_C1A 144 358 IPR039417 -
Mepo3g07160 472 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 161 172 IPR000169 -
Mepo3g07160 472 Pfam Cathepsin propeptide inhibitor domain (I29) 55 113 IPR013201 -
Mepo3g07160 472 SUPERFAMILY Cysteine proteinases 48 359 IPR038765 -
Mepo3g07160 472 Coils Coil 55 75 - -
Mepo3g07160 472 SMART GRAN_2 382 439 IPR000118 -
Mepo3g07160 472 Gene3D Granulin 380 448 IPR037277 -
Mepo3g07160 472 Pfam Papain family cysteine protease 143 359 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07160 Mepo-Chr3 85277481 85283316 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07160 3 85277481 85283316 Mepo1g01858 1 18526028 18529420 ECH
Mepo3g07160 3 85277481 85283316 Mepo2g02358 2 33369450 33371556 ECH
Mepo3g07160 3 85277481 85283316 Mepo3g07160 3 85277481 85283316 ECH
Mepo4g00300 4 4672144 4677071 Mepo3g07160 3 85277481 85283316 PCT