Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07128 ATGTCTGGTCGTCGGGGAGAACATCATTCGGTTCCTCTTTCAGTGCTGTTGAAGCGTGAACCGGTGAGCGAGAAAATAGAGAAACCTGATATGGTTGTTGTGTATGGAAATGCTAGCGAGAATAAGAAAGGAGAAGATTTCATTTTACTAAAGACCGAATGTCAAAGAGTTGTTTGTGATTGTGTTTCTACCTATTCTGTTTTTGGGCTATTTGACGGACACAATGGATCTGCTGCTGCGATTTATGCCAAGGAGAATCTTCTGAACAATGTTTTAGGTGTCATTCCTCCAGATCTCAACAGAGATGAGTGGGTAGCAGCGCTGCCGAGGGCTTTGGTTGCTGGCTTTGTGAAGACTGATAAAAAATTTCAACAGAAAGCACAAACATCGGGAACAACTGTAACCTTCGTGATTATAGAAGGATGGGTCGTAACAGTTGCATCAGTTGGTGATTCCTGTTGCATACTTGAACCTTCTGAAGGTGGGCTTCATTACTTGTCAGCAGATCATCGACTAGACACAAATGAAGAAGAGAGGGTGCGCATCACTTCTAGTGGGGGTGAAGTTGGTCGGCTAAATACAGGCGGAGGTGCAGAGGTTGGTCCGTTGAGATGTTGGCCTGGTGGCTTGTGTCTCTCTCGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTCCCTGTACCATATGTAAAGCAAGTGAAGCTTTCCAATGTTGGAGGAAGACTTGTTATCAGCAGTGATGGAGTCTGGGATGCTCTAACTGCAGAAATGGTCCTTGATTGTTGTCGTGGCATGTCGGCGGAGGCTGCAGCACCACATATTGTAAAAGAATCTTTGCAAGCAAAGGGACTTAGAGATGACACAACCTGCATCGTGGTCGATATATTACCCCAGGAGAAACTACCTACTTCTGTACCAACACAAAAGAAACCGGTAAAAGGAATGTTGAAGGCCATTTTCCGCAAAAAGCCCTCCGAGTCATCTTCATACGTTGAAAAAGAATATGTTGAGCCAGATATGGTATGGGAACTATACGAGGAAGGATCTGCCTTGCTTTCAGAAAGGTTTGAAACAAAATATCCACTCTGCAACATGTTCAAGTTGTTCATGTGTGCAGTGTGTCAAGTAGAGATTAAACCTGGTGAGGGTATTTCAGTACATGAGGGTGTACCTAATGCAAGGAAACCGCGTCCCTGGGATGGACCTTTCCTTTGCTTAAGTTGCCAAAAGAAGAAAGAGGCCATGGAAGGGAAACGGATATCAGATAGACGTAGCAATGGAAGTGACTAA 1293 0.4432 MSGRRGEHHSVPLSVLLKREPVSEKIEKPDMVVVYGNASENKKGEDFILLKTECQRVVCDCVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLGVIPPDLNRDEWVAALPRALVAGFVKTDKKFQQKAQTSGTTVTFVIIEGWVVTVASVGDSCCILEPSEGGLHYLSADHRLDTNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSNVGGRLVISSDGVWDALTAEMVLDCCRGMSAEAAAPHIVKESLQAKGLRDDTTCIVVDILPQEKLPTSVPTQKKPVKGMLKAIFRKKPSESSSYVEKEYVEPDMVWELYEEGSALLSERFETKYPLCNMFKLFMCAVCQVEIKPGEGISVHEGVPNARKPRPWDGPFLCLSCQKKKEAMEGKRISDRRSNGSD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07128 430 ProSiteProfiles PPM-type phosphatase domain profile. 34 296 IPR001932 -
Mepo3g07128 430 SMART PP2C_4 22 294 IPR001932 -
Mepo3g07128 430 SUPERFAMILY PP2C-like 41 296 IPR036457 -
Mepo3g07128 430 Pfam Protein phosphatase 2C 60 283 IPR001932 -
Mepo3g07128 430 Gene3D - 28 304 IPR036457 -
Mepo3g07128 430 CDD PP2Cc 41 296 IPR001932 -
Mepo3g07128 430 PANTHER PROTEIN PHOSPHATASE 45 295 IPR015655 GO:0004722|GO:0006470
Mepo3g07128 430 FunFam probable protein phosphatase 2C 12 35 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07128 Mepo-Chr3 84944690 84948862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07128 5 430 PP2C-type Phosphatase Gene Family AT1G47380 75.410 0.0 676
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07128 3 84944690 84948862 Mepo3g07128 3 84944690 84948862 ECH
Mepo4g00242 4 3921340 3927147 Mepo3g07128 3 84944690 84948862 PCT