Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05613 ATGCAGAAGAAAAACATTCTATTATTCTTGTTCCTCTTCAAACTCTTCTCAACAACAACCTCAAAATCAACAATAGAACCATGCACAACCTCCGACACATGCAACTCTCTCCTAGGTTACACTCTCTACACAGACCTCAAAGTCTCCGAACTCTCTTCCCTCTTCCAAATCGACCCAATCTCACTCCTCACCGCAAACTCCATTGACATCTCTTACCCTGACGTTGAACACCACATCCTCCCTTCAAAACTCTACATCAAAATCCCAATCCAATGCTCTTGTGTAGATGGAATCCGCAAATCCGTTTCAACCAACTACAAAATCCGTCCTTCTGACACTCTTTCATCCATTGCTGATTCCATTTACGGTGGTTTGGTTTCTTCTGATCAGCTTAGAGAAGCTAACTCTGTAACGGATCCGAATGTTCTTGATGTTGGTCAGAACCTTGTTGTTCCTCTTCCTTGTACTTGTTTTAATGGTTCTGATAATGGGTTGCCCGCGATTTATATGTCGTATGTTGTTCAGCCGTTGGATAGTTTGAATTCTATTGCTGCTAGCTATTTTACTACTCTTACTGATTTGATGAATGTTAATGCTATGGGGACTACTGGGATCTCTGCTGGTGACATTCTTGCTATTCCTATTCCCGCTTGTTCTTCAAATTTTCCAAAATCTTCTGCTGATTTTGGATTGCTTGTCCCTAATGGAAGTTATGCCATTACAGCAGGACACTGTGTGCAGTGTAGCTGTGGACCCCGAAACTTAAATTTGTACTGTATGCCAGCTTCTCTAGCTGTTTCTTGCTCGAGCATGCAATGTAAGAACAGCAATCTTATGCTTGGTAATGTCACTGTGCAACAGACTAGTGGTGGTTGCAATGTGACTTCTTGCACTTACGATGGTATTGTTAATGGTACCATAGCAACAACGTTGACCCCATCCCTTCAGCCTCGATGTCCAGGGTCGCAGGAATTCCCTCCTCTTGTCGCCCCACCTACAGTTGTTCCGAGAGAATCATTATTTGCACCGGCCCCATCACCATCATCACTGTTTGACGGAACTGATGGGAGATCACCCAAATCCTCTGTGGTGCCTTCAACAGGATTTACTCCTGCATTAGGCCCTATTAGTGGAATTTCTTCTGGTGCTTCTGCCGCATGCTCCTTGGTGAAACCATTACCCACTTTGACACTCACACTTGTGTTATTATTTGTCAAGTTGATGATCCCTGTAGCCTTGTAA 1242 0.4364 MQKKNILLFLFLFKLFSTTTSKSTIEPCTTSDTCNSLLGYTLYTDLKVSELSSLFQIDPISLLTANSIDISYPDVEHHILPSKLYIKIPIQCSCVDGIRKSVSTNYKIRPSDTLSSIADSIYGGLVSSDQLREANSVTDPNVLDVGQNLVVPLPCTCFNGSDNGLPAIYMSYVVQPLDSLNSIAASYFTTLTDLMNVNAMGTTGISAGDILAIPIPACSSNFPKSSADFGLLVPNGSYAITAGHCVQCSCGPRNLNLYCMPASLAVSCSSMQCKNSNLMLGNVTVQQTSGGCNVTSCTYDGIVNGTIATTLTPSLQPRCPGSQEFPPLVAPPTVVPRESLFAPAPSPSSLFDGTDGRSPKSSVVPSTGFTPALGPISGISSGASAACSLVKPLPTLTLTLVLLFVKLMIPVAL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05613 413 Pfam LysM domain 172 214 IPR018392 -
Mepo3g05613 413 Pfam LysM domain 106 152 IPR018392 -
Mepo3g05613 413 Gene3D LysM domain 165 226 IPR036779 -
Mepo3g05613 413 Gene3D LysM domain 98 158 IPR036779 -
Mepo3g05613 413 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 7 323 - -
Mepo3g05613 413 ProSiteProfiles LysM domain profile. 170 213 IPR018392 -
Mepo3g05613 413 CDD LysM 106 151 IPR018392 -
Mepo3g05613 413 SMART LysM_2 171 214 IPR018392 -
Mepo3g05613 413 SMART LysM_2 105 152 IPR018392 -
Mepo3g05613 413 ProSiteProfiles LysM domain profile. 104 151 IPR018392 -
Mepo3g05613 413 SUPERFAMILY LysM domain 170 215 IPR036779 -
Mepo3g05613 413 SUPERFAMILY LysM domain 105 153 IPR036779 -
Mepo3g05613 413 CDD LysM 171 213 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05613 2 388 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 66.158 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05613 - - gmx:100808966 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05613 3 70107062 70110191 Mepo3g05613 3 70107062 70110191 ECH