Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05403 ATGGAGAATTTGTTGGGACTTCTGAAAATTCATGTTCAAAGAGGTGTTAATCTTGCTATCAGAGATGTAGTCAGCAGTGATCCTTATGTTGTCATCAAAATGGGAAAACAGAAGCTGAAGACCAGGGTAGTGAAGAAGAATCTAAATCCTGAGTGGAATGAGGACTTGACTTTATCGATTTCAGATCCTCATACTCCAATCCATCTATATGTGTATGATAAGGACACATTCAGCTTGGACGACAAAATGGGGGATGCTGAGTTTGACATCGGCCCATTTTTTGAAGCAGTAAAGATGCGGTTGGCAGGTCTCCCAAATGAGGCTATAGTTACAAGGGTGCAACCTAGCAGACAAAATTGCTTAGCAGAAGAGAGTCACATTGTTTGGAAAGATGGTAAAATTTTCCAAAACATGGTTCTTAGACTAAGAAATGTTGAATCTGGGGAAGTGGAACTCCAGTTGCACTGGGTTGACATTCCTGGTTCAAGGGGTATGTAG 498 0.4116 MENLLGLLKIHVQRGVNLAIRDVVSSDPYVVIKMGKQKLKTRVVKKNLNPEWNEDLTLSISDPHTPIHLYVYDKDTFSLDDKMGDAEFDIGPFFEAVKMRLAGLPNEAIVTRVQPSRQNCLAEESHIVWKDGKIFQNMVLRLRNVESGEVELQLHWVDIPGSRGM 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05403 165 Pfam C2 domain 7 92 IPR000008 -
Mepo3g05403 165 CDD C2_ArfGAP 5 148 - -
Mepo3g05403 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
Mepo3g05403 165 Gene3D C2 domain 3 163 IPR035892 -
Mepo3g05403 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Mepo3g05403 165 SMART C2_3c 7 102 IPR000008 -
Mepo3g05403 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05403 Mepo-Chr3 67597880 67600022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05403 38 165 C2H2 Transcription Factor Family AT1G70790 60.769 5.96e-53 163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05403 3 67597880 67600022 Mepo7g00923 7 14423070 14425816 ECH
Mepo3g05403 3 67597880 67600022 Mepo3g05403 3 67597880 67600022 ECH
Mepo2g03035 2 39988473 39989807 Mepo3g05403 3 67597880 67600022 ECH