Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01514 ATGGTTTATACTTCTCTCCCACCATATATGGATCCATCCAATTGGCATCAACAGCAACCAAATCACCAAGTGGCCAATACTAGTGTCAACACTCCTCTCCTTATTCCACCACCACAGCCTACACCATCGAACCTAACACCATCGCAGCCTCATGGAGGCTCGATCAGGCCAGGTTCAATGGCAGATAGGGCAAGGATGGCAAACATACCTATGCAAGAGCCTTTACAAAAATGTCCAAGGTGTGATTCCACCAACACAAAGTTTTGTTACTTCAACAACTACAGTCTCTCGCAGCCGCGACACTTCTGCAAGGCTTGTCGAAGGTATTGGACAAAGGGTGGTGCCCTTAGAAGTGTCCCGGTTGGCGGTGGTTGCCGAAGAAACAAAAGGTCTAAATCAAGCAGCAACAACACCTCCAAGTCGCCGGCTAGCTCAGACCGCCAAACTAGCTCAACAAACAACTCTCCTGCGGTACTCAGTTCCCCAACGCCACCACCGATGAGATTCATGGCTCCTTTGCATCACCTTGGCGATCACCTCAGTGAAATAGGACTAAACTATGGGTTTTCTGGTCCAATGGGAGGTGTTGGAGACTTAAATTTCCATTTAGGAAGCTCTTTAGGTGGAGGCGTTGGTAACGGTGGTGGTTCTACTTCGATTTTACCAGTTGGTAATTTTGAGCAATGGAGGATGCCACAAACTCACCAATTTCCTTTCTTGTCAACTTTAGAAGCTTCTTCTTCCCATGGATTGTTGTATCCATTTGAAGGTGGTGGTGGTGGTAATGATCAATCCCATGTATATGGTGGTGTGTCTAAGGTATTATCAAATAATTCTAGTGTGAAAATGGAAGAGAATCAATCTAGACAATTCTTGGGAATGATCAACAACAACAACAACAATAACAACAACAACAATAATAATAATCCTAATAGTGAACAATATTGGAGTGCTTCTGCTGGTGGTGGTGCTAATAATTCACCTTGGACAGATCTTTCTACAGCTTATAACTCATCTTCAGCTACTACAAATTCCAACTATAGGACATAA 1050 0.44 MVYTSLPPYMDPSNWHQQQPNHQVANTSVNTPLLIPPPQPTPSNLTPSQPHGGSIRPGSMADRARMANIPMQEPLQKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTKGGALRSVPVGGGCRRNKRSKSSSNNTSKSPASSDRQTSSTNNSPAVLSSPTPPPMRFMAPLHHLGDHLSEIGLNYGFSGPMGGVGDLNFHLGSSLGGGVGNGGGSTSILPVGNFEQWRMPQTHQFPFLSTLEASSSHGLLYPFEGGGGGNDQSHVYGGVSKVLSNNSSVKMEENQSRQFLGMINNNNNNNNNNNNNNPNSEQYWSASAGGGANNSPWTDLSTAYNSSSATTNSNYRT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01514 349 MobiDBLite consensus disorder prediction 128 158 - -
Mepo3g01514 349 Pfam Dof domain, zinc finger 75 130 IPR003851 GO:0003677|GO:0006355
Mepo3g01514 349 ProSiteProfiles Zinc finger Dof-type profile. 76 130 IPR003851 GO:0003677|GO:0006355
Mepo3g01514 349 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 52 315 IPR045174 GO:0003700|GO:0006355
Mepo3g01514 349 MobiDBLite consensus disorder prediction 120 168 - -
Mepo3g01514 349 MobiDBLite consensus disorder prediction 28 59 - -
Mepo3g01514 349 Coils Coil 347 349 - -
Mepo3g01514 349 ProSitePatterns Zinc finger Dof-type signature. 78 114 IPR003851 GO:0003677|GO:0006355
Mepo3g01514 349 MobiDBLite consensus disorder prediction 293 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01514 Mepo-Chr3 22387948 22389507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01514 1 236 C2C2-Dof Transcription Factor Family AT2G37590 42.279 2.93e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo3g01514 zf-Dof 4.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01514 - - tpra:123888034 521.546