Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00611 ATGGTCTTCCCCTCCCTTCCAATCTACCTAGATCCACCCAACTGGACACAACAGCAAGCAGGAATTGGTATTGGCGATCAAAATCCATCATCTTTGCAGCCGCTATCAGCTTCAATGGTGACTCTCACGGTTGAAGCTGATCGCAGCTACGAAGGGTCTAGAAGACCAGTATCAATGACCGATCGAGCTAAGTTGTCAAAGATACACCAAAATGATGCTGCAGCAGCACAGAAATGTCCAAGATGTGAATCAACAAACACAAAGTTCTGCTACTACAACAACTATAATCTTTCACAACCACGCCATTTTTGCAAAACTTGTCGTCGTTATTGGACTAAAGGTGGTGCACTTCGAAACGTTCCTGTTGGAGGTGGTTGTAGAAGGAACAATAAAAGAAGAAAAGGAAATTCAGTATCAAAATCACCTCTGAAACCTAATCATAATGATCATCTCCAGGTCGGTACCGGTGCTGCTGCTGGTGGTTCTAGCTCAGCAAGTGCAAATTCTTCTTCTAATAATGGTTGCACTAATTCTAATGCGAATGTCGGAATGCCTCATTTTCCAACACAATTTCCATTCATAACCTCTTTACATCATCATAACGACAATAGTTACGCTTCTGAGGGCATTGGTTCTTTGTTGGCCAAAAATATGAGCAATAGTACTGCTACTAATGTTGAGTTTCAACTTGGTAGTGGTTCTTCAATTGGTAATGGTAATGGTGGCTCTTTGTTGATATCAAATGGCATTGGTGAACAATGGAGGTTTCCGAATTCGCTACAAGTTCATCAGCAACAATATCAACAATTCCCTTTCTTGAGTAATTTGCAACCACAAATTGGATTATTTCAATTTGGTGGAGAAAATAATGGTGAACCACAAAGAAATTTGTTTCGTTCTAAGGAAACATATTCTTCAAGTGTTAGTATTGGAATGATGCCTCAAGTTAATACAGTTAAAGTGGAAGAAAACAATCATCAAGTTTTGAGTTTGCCAAAAAATCTTTTGAATGGTTCAGGAAATAGTAATGATCTATTTTGGAATGGAAATGGAAATGGAAATGGAAGTGGAAATGGTAATGAAAATGCATGGAATGAAGTTCCTAGTTTCACTTCACCACCTTGTGATCCTCAAATCTAG 1140 0.3904 MVFPSLPIYLDPPNWTQQQAGIGIGDQNPSSLQPLSASMVTLTVEADRSYEGSRRPVSMTDRAKLSKIHQNDAAAAQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRRNNKRRKGNSVSKSPLKPNHNDHLQVGTGAAAGGSSSASANSSSNNGCTNSNANVGMPHFPTQFPFITSLHHHNDNSYASEGIGSLLAKNMSNSTATNVEFQLGSGSSIGNGNGGSLLISNGIGEQWRFPNSLQVHQQQYQQFPFLSNLQPQIGLFQFGGENNGEPQRNLFRSKETYSSSVSIGMMPQVNTVKVEENNHQVLSLPKNLLNGSGNSNDLFWNGNGNGNGSGNGNENAWNEVPSFTSPPCDPQI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00611 379 MobiDBLite consensus disorder prediction 346 379 - -
Mepo3g00611 379 MobiDBLite consensus disorder prediction 346 373 - -
Mepo3g00611 379 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
Mepo3g00611 379 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Mepo3g00611 379 MobiDBLite consensus disorder prediction 121 177 - -
Mepo3g00611 379 MobiDBLite consensus disorder prediction 157 177 - -
Mepo3g00611 379 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Mepo3g00611 379 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 67 261 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00611 Mepo-Chr3 8429175 8431050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00611 17 275 C2C2-Dof Transcription Factor Family AT3G55370 40.000 1.08e-36 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo3g00611 zf-Dof 9.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00611 - - cam:101502096 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00611 3 8429175 8431050 Mepo3g00611 3 8429175 8431050 ECH