Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03731 ATGTTAGATAACACAGTTAATTCCTCTTCTGATGCCACTACTGCTTTTGCATTATCAGAAAATGGGGGTGCTAATAACAAAAGAAAAAGAAGACCAGCAGGCACACCAGATCCAGATGCTGAAGTTGTGTCTCTATCACCAAAGACTTTGTTAGAATCAGACAGATATGTTTGTGAGATCTGTAACCAAGGGTTTCAAAGAGACCAGAATCTTCAAATGCATAGAAGAAGACACAAAGTACCATGGAAATTGTTGAAAAGAGAAACAACACAAGGATTAAAAAAGAGAGTATTTGTTTGTCCAGAACCAAGTTGTTTGCATCATGATCCATGTCATGCACTAGGTGACCTCGTTGGAATCAAGAAACATTTTAGAAGAAAACATAGTAATCATAAACAATGGGTTTGTGACAAATGCAACAAAGGTTATGCTGTTCAATCTGATTATAAAGCACATATCAAAACATGTGGTACCAGAGGACATTCGTGTGATTGTGGTCGTGTGTTTTCCAGGGTGGAGAGTTTTATAGAACATCAAGACGCATGCACAATCCGAGGGAAGCACCAACCAGAGTTCCAAGCAACAACAATGCAGCCTGCATGCTCTTCAAGAACTGCTTCAAGCACAAGTCCATCTAGTGAGGCAAATTTTAGTATATCAGCCCCATTACAAGGATTACCAGTGCTTCCAAAACCACCTGATAAACCATTATCAGCACCTACCTTATTAACTAATTCAGATATACACAACAAGCCTTCCACTTCTCATCACCACCATAACTTAGAACTTCAACTCTTACCTTCCTCTATAAACCCTCAAGTAGAAAAACCAAATTCAAACGATCAAAATTACGAAACACACTTGAAACTTTCAATAGGAAATAATGAGTCAGAGAAACAAAGGAATGATGTATCCACATTGGAACTAGCAAGGTTGAAAGAGTTTACTAGTGGGGAGCTAAAGTTGGCAATGGCAGAAAAGGCTTATGCAGAAGAAGCTAGAAAGGAAGCTAAACGTCAAACTGAGATAGCTGAAGTTGAGTTTGAAAATGCTAAAAGGATAAGAAAACAAGCACAAGATGAACTTGGAAAAGCTGAAGCTTTGAGAAAACAAGCTATTAAGAAGATAAGTAACACTGTTATGGAAGTAACATGCCAAGCTTGTAAGCAACAGTTTCAATCTTCAACTTCTGGTGTTCCATCAGAAGAAACATCCATTGTTATGGGTTACATGTCCTCAGCCACCACTGAAGGGGAAGCAGAATGA 1266 0.3855 MLDNTVNSSSDATTAFALSENGGANNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETTQGLKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCNKGYAVQSDYKAHIKTCGTRGHSCDCGRVFSRVESFIEHQDACTIRGKHQPEFQATTMQPACSSRTASSTSPSSEANFSISAPLQGLPVLPKPPDKPLSAPTLLTNSDIHNKPSTSHHHHNLELQLLPSSINPQVEKPNSNDQNYETHLKLSIGNNESEKQRNDVSTLELARLKEFTSGELKLAMAEKAYAEEARKEAKRQTEIAEVEFENAKRIRKQAQDELGKAEALRKQAIKKISNTVMEVTCQACKQQFQSSTSGVPSEETSIVMGYMSSATTEGEAE 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03731 421 FunFam protein indeterminate-domain 12-like 35 104 - -
Mepo2g03731 421 MobiDBLite consensus disorder prediction 195 220 - -
Mepo2g03731 421 Coils Coil 320 375 - -
Mepo2g03731 421 MobiDBLite consensus disorder prediction 1 21 - -
Mepo2g03731 421 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 14 385 IPR031140 -
Mepo2g03731 421 SMART c2h2final6 134 161 IPR013087 -
Mepo2g03731 421 SMART c2h2final6 98 128 IPR013087 -
Mepo2g03731 421 SMART c2h2final6 56 78 IPR013087 -
Mepo2g03731 421 SUPERFAMILY beta-beta-alpha zinc fingers 55 154 IPR036236 -
Mepo2g03731 421 MobiDBLite consensus disorder prediction 1 43 - -
Mepo2g03731 421 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 78 IPR013087 -
Mepo2g03731 421 Pfam Zinc finger, C2H2 type 56 78 IPR013087 -
Mepo2g03731 421 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Mepo2g03731 421 Gene3D Classic Zinc Finger 34 99 - -
Mepo2g03731 421 MobiDBLite consensus disorder prediction 195 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03731 Mepo-Chr2 46633982 46636914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03731 17 421 C2H2 Transcription Factor Family AT2G01940 56.872 7.32e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo2g03731 zf-C2H2 0.0039 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03731 2 46633982 46636914 Mepo2g03731 2 46633982 46636914 ECH