Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03676 ATGAACATGAGTGAAGGGAACAAGATGGTTACTGTATGGTTAATCACCGTTGCTGTAGTAGCAAGTGTTGGGTTTACACTAACAGAAGCACAACCAGAAGCAAACTTCAAGTGTTCAACAGAAAACGCCATGTGTCGTAGTTTAACCGACTACACCAGCACAAACTCAACAACCTTGAAGGAAATAGCAACTTTGTTCGGTGTAAAACACTTCCTAGACCTCCTAGGAGCTAACAACCTCCCAAGCAACACCAACAACAGTTACAAAGTTAATCCCAACCAAGTCATCAAGGTTCCATTCCCCTGCAAATGTAGTAACGGAACAGGTACATCGAACCATGTACCCAAGTACAAGATTGTACCGGGTGATGAGCTGGATGCAATAGCGAGGGTTAGATTTGCGGGTTTGGTGAAGTATCAACAGATCCAAACGGCGAATAAGATTCCAGATGCTAACAATATAACTGCTGGTGCTACCATTTGGATTCCTTTGCCTTGTAGCTGTGATCAGGTGGATGGGAGCAGTGTGATGCATTATGCACATATTGTTCCAATTGGGAGTAGTATTGAATCTATTGCTCAAGAATATTCTACTAGTCCACAGACTCTGCTGTCACGCAACGGTCTTGATGACCCTAAAAAGCTTCAAGCTGGTCAGCTTCTTGATGTTCCCCTTCCAGTTTGTAACTCGAGTATCAAAAGTGATTCATTGGATTTTCCATTACTTGTGCCGAATGCAACATATTTCTACACTGCACATGAATGTGTCAAATGTAAATGTGATTCTACTGGTGGTAACAAGAACTTACAATGTGAGGCATCGAATCTAAAGCCGATAAATAATCGGACGGTTTGTCCGTCTCTGGAATGCTCTGGGAGTGTGTTGCTTGGGAACACTACATCCACAAATTCGTGTAGCCGTACAGTTTGTGATTACACTGGTTATTATACTTCTCGCAATATCTCTACCACTCTTGCTACTCAGGACACTTGTGCTGTGCCACCTAGTGGTTCAGGTGATTCAGATTCAGGGGCATCTAGGAGCATGTTGAATGGCTGGGTTTTGAATAAGCTTCTAATTCTCATTCACTTTCTCATCTTATTTGTCTATCTTTTGTAG 1119 0.4245 MNMSEGNKMVTVWLITVAVVASVGFTLTEAQPEANFKCSTENAMCRSLTDYTSTNSTTLKEIATLFGVKHFLDLLGANNLPSNTNNSYKVNPNQVIKVPFPCKCSNGTGTSNHVPKYKIVPGDELDAIARVRFAGLVKYQQIQTANKIPDANNITAGATIWIPLPCSCDQVDGSSVMHYAHIVPIGSSIESIAQEYSTSPQTLLSRNGLDDPKKLQAGQLLDVPLPVCNSSIKSDSLDFPLLVPNATYFYTAHECVKCKCDSTGGNKNLQCEASNLKPINNRTVCPSLECSGSVLLGNTTSTNSCSRTVCDYTGYYTSRNISTTLATQDTCAVPPSGSGDSDSGASRSMLNGWVLNKLLILIHFLILFVYLL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03676 372 CDD LysM 117 162 IPR018392 -
Mepo2g03676 372 Gene3D LysM domain 114 172 IPR036779 -
Mepo2g03676 372 Gene3D LysM domain 178 234 IPR036779 -
Mepo2g03676 372 ProSiteProfiles LysM domain profile. 179 223 IPR018392 -
Mepo2g03676 372 SUPERFAMILY LysM domain 179 225 IPR036779 -
Mepo2g03676 372 Pfam LysM domain 181 224 IPR018392 -
Mepo2g03676 372 Pfam LysM domain 117 163 IPR018392 -
Mepo2g03676 372 CDD LysM 181 223 IPR018392 -
Mepo2g03676 372 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 12 333 - -
Mepo2g03676 372 ProSiteProfiles LysM domain profile. 115 162 IPR018392 -
Mepo2g03676 372 SMART LysM_2 116 163 IPR018392 -
Mepo2g03676 372 SMART LysM_2 50 99 IPR018392 -
Mepo2g03676 372 SMART LysM_2 180 224 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03676 9 315 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 46.129 4.58e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03676 - - cam:101506878 497.278