Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03315 ATGGGTTTGAGTTCTAAACAGGTTATTTCTAGCAGTGGACTTGATTGGAAACAAACCTTATTAGAATCTCAAGATTTGGAACTTCCAAAGCCTCATAATCTAATGAGAAAACAACAACAGCAACAAACTCAGCAACAAGCAGAACATTTGAATTGTCCAAGATGTGATTCAACAAACACAAAGTTTTGTTACTACAACAATTACAACAAGTCTCAACCTCGTCATTTCTGTAGAGCTTGTAAAAGACACTGGACTAAAGGTGGAACTCTACGCAATGTTCCTGTTGGTGGTGGCAGAAAGAATAAGAGGATCAAAAAACCAACCATACCAGTTACTTCTTCCACCACCATAACTACTACTACTTGCACCACCTCTATTACAAATATGAATAGCAACATGGCAATTCAAACACCTCTTCAAGTTGGTGATCAAAAAAGCATTCCTTCATCTCTATATCAAGCTCTAATTCATCCACCATCTTTGCTTCTACAACAGAATATGATGAATAACTTATCAGAAAACAAAGATTTTGGTATTGGTAATGGTAATGGTAATGGTAATGTTAATGGCATGTTTCCTCATCAAAATCAAACCATGCTATTTCCCTTTTCAACATCAAGCTCTTTTGACACAACTACTTGTTCATCATCCAATGTTTATTACTATGGAGAGGAGTTCAAAACAATGGAGGAACCAATAATTCCAAGCACTGGCTGCACTAACACAAAGCCATGGGAGATACCAGCAGCATCAACAAGTGGTGGCATGGAAAGTTCAAAGTATTGGAATTGGGAAGACATTGATTCATTGGTCTCAACTGATCTAAAGAATCCTTATTGGGATGATTCTGATATCAAACCTTGA 864 0.3692 MGLSSKQVISSSGLDWKQTLLESQDLELPKPHNLMRKQQQQQTQQQAEHLNCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRIKKPTIPVTSSTTITTTTCTTSITNMNSNMAIQTPLQVGDQKSIPSSLYQALIHPPSLLLQQNMMNNLSENKDFGIGNGNGNGNVNGMFPHQNQTMLFPFSTSSSFDTTTCSSSNVYYYGEEFKTMEEPIIPSTGCTNTKPWEIPAASTSGGMESSKYWNWEDIDSLVSTDLKNPYWDDSDIKP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03315 287 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 37 208 IPR045174 GO:0003700|GO:0006355
Mepo2g03315 287 ProSiteProfiles Zinc finger Dof-type profile. 50 104 IPR003851 GO:0003677|GO:0006355
Mepo2g03315 287 Pfam Dof domain, zinc finger 49 102 IPR003851 GO:0003677|GO:0006355
Mepo2g03315 287 ProSitePatterns Zinc finger Dof-type signature. 52 88 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03315 Mepo-Chr2 42814047 42815830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03315 50 107 C2C2-Dof Transcription Factor Family AT1G28310 81.356 4.67e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo2g03315 zf-Dof 1.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03315 - - mtr:25493206 513.842