Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03063 ATGGATGATTATGGAGAAGGGTCATTATCATCATCTTACTACAGTATTCTTGGTGTTAGTTCAGATTCTTCTTTAGATGAGATAAGGCGTGCTTATAGGAAGCTTGCTATGCAATGGCATCCAGATAGATGGACAAGAACACCTTCTTTATTGAGTGAAGCCAAATGTAAATTCCAGAAAATTCAAGAAGCTTATTCAGTGTTATCTGATCCCAAGAAAAGAAATATGTACGATGCTGGCTTGTATGATCCTCGAGAGGAAGAGGATGAGGAATTTTCTGATTTTGTGGATGAAATGGTGTCCCTTATGGCTGAAGTTAGGCGAGAGGAGAAGGTTTATGGTTTGGAGGAGTTGCAGGACATGTTCATGGAGATGGCTGAAGGATTCGAGAGTCCTTCAATGTATTGTGGGACATCATCGGTGATTGATGAATCCTTTGCTAAGAGAGAAAGTGTATTGACACAATAG 468 0.3996 MDDYGEGSLSSSYYSILGVSSDSSLDEIRRAYRKLAMQWHPDRWTRTPSLLSEAKCKFQKIQEAYSVLSDPKKRNMYDAGLYDPREEEDEEFSDFVDEMVSLMAEVRREEKVYGLEELQDMFMEMAEGFESPSMYCGTSSVIDESFAKRESVLTQ 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03063 155 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
Mepo2g03063 155 Pfam DnaJ domain 13 78 IPR001623 -
Mepo2g03063 155 PRINTS DnaJ domain signature 53 73 IPR001623 -
Mepo2g03063 155 PRINTS DnaJ domain signature 14 32 IPR001623 -
Mepo2g03063 155 PRINTS DnaJ domain signature 32 47 IPR001623 -
Mepo2g03063 155 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Mepo2g03063 155 CDD DnaJ 18 70 IPR001623 -
Mepo2g03063 155 Gene3D DnaJ domain 9 133 IPR036869 -
Mepo2g03063 155 SMART dnaj_3 11 73 IPR001623 -
Mepo2g03063 155 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Mepo2g03063 155 PANTHER PUTATIVE, EXPRESSED-RELATED 10 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03063 Mepo-Chr2 40283474 40285852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03063 13 79 C2H2 Transcription Factor Family AT1G74250 50.000 4.15e-16 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03063 2 40283474 40285852 Mepo2g03063 2 40283474 40285852 ECH