Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03051 ATGGCAGTTTTACCTACAAGTTCCTCCAACTTGGAATTGACCATATCTATCCCAGGTTTTGCTTCTTCACCGATATCTTTTCTCCCCTCATCATCTGTGAAAAAGTTGGATGTGAACCGAGTAACCGTAGAAGAAGAATGGATGGCACTAGAAGAGGAAGAAGAAAGCAGCGTAAATGGAGACACTCCTCGCAAGAAACTGCGTCTAACAAAGGAACAGTCCCATCTCCTTGAAGAAAGCTTCAGAAAAAACCACACTTTAAACCCAAAGCAGAAAGAGTGTTTGGCAATGCAGCTTAAGCTCCGACCAAGGCAAGTGGAGGTGTGGTTTCAAAATCGTAGGGCCAGGAGCAAGTTGAAGCAGACAGAGATGGAGTGCGAATACCTTAAGAGGTGGTTTGGGTCTTTAACAGAGCAGAACAGGAGGCTACAAAGAGAAGTTGAGGAGCTTAGGGCTATGAAGGTGGGTCCACCCACTGTGTTATCGCCTCACAGTTCTGAGCCTCTTCCAGCTTCAACCTTATCAATGTGTCCCCGATGTGAGCGTGTCACCACCAATACCACCGCCACAGCCGACAAATTAGTCATCGATGCCGTCGCTTTGTCCCCTAGAGTGTGA 618 0.4725 MAVLPTSSSNLELTISIPGFASSPISFLPSSSVKKLDVNRVTVEEEWMALEEEEESSVNGDTPRKKLRLTKEQSHLLEESFRKNHTLNPKQKECLAMQLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVLSPHSSEPLPASTLSMCPRCERVTTNTTATADKLVIDAVALSPRV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03051 205 SMART halz 120 163 IPR003106 GO:0006355|GO:0043565
Mepo2g03051 205 Coils Coil 133 153 - -
Mepo2g03051 205 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 32 191 - -
Mepo2g03051 205 FunFam Homeobox-leucine zipper protein 18 49 125 - -
Mepo2g03051 205 Pfam Homeodomain 64 118 IPR001356 GO:0003677
Mepo2g03051 205 Gene3D - 56 127 - -
Mepo2g03051 205 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Mepo2g03051 205 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Mepo2g03051 205 Pfam Homeobox associated leucine zipper 120 154 IPR003106 GO:0006355|GO:0043565
Mepo2g03051 205 CDD homeodomain 63 121 IPR001356 GO:0003677
Mepo2g03051 205 SMART HOX_1 62 124 IPR001356 GO:0003677
Mepo2g03051 205 SUPERFAMILY Homeodomain-like 55 121 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03051 Mepo-Chr2 40145566 40149957 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03051 33 199 Homeobox Transcription Factor Family AT1G70920 57.803 3.97e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo2g03051 Homeodomain 3.5e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03051 2 40145566 40149957 Mepo2g03051 2 40145566 40149957 ECH