Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02933 ATGGTTGGAGGTGGAAATGGAGAGTGGCCTTCAGGTGGGGGGTTTAGTCCAGGTCCCATGACTTTGCTTTCCAACTTGTTTGGTGACAACGATGATATCAAGTCTTTCTCGGAGCTCCTCGCCGGCGACACGTTGGATGTGGAGCATGGAGGAGGAGGAGGAAGAAGTGGTGGTGGCTTGTCACCGTTGGCCATGTTCACTGCTCCACCACAGCAAGCACTAGCACAAGCCTACTCAAATGCTCAAATCCAATCAGAACATCCATTTTCTGCATCATTAGTACCCAACAGTACCTCATTGTCACAAGTTCCATCAATAACATTCAATAACATTGCACAACAACTGATACCAAACTCTGTTGAGTATTCTTCTAACTCAGAACAAAGATTACAGAAGTCTTCTTCTGTGAATGTTGACAAGGCTAATGACGACGGCTACAACTGGAGGAAGTATGGACAGAAACAAGTGAAAGGTTGCGAGTTTCCTCGAAGTTATTACAAGTGCACACATCCAAGCTGTCTTGTGACGAAAAAAGTTGAACGTGATCCTATTGATGGTCATGTAACTGCAATTATTTATAAAGGAGAACACATTCATCAACGCCCTCGTCCTAGCAAGCTCACAAACGACAATTCAAGCGTGCAACAAGTTTTGTCAGGAACAAGTGACAGCGAGGAAGAAGGAGATCATGAAACTGAAGTAGATGATGAACCTGGTCTCAAGAGAAGAAAAACAGAAGCCAAACTCCTGAATTCAACCCTTTCACATAGGACTGTCTCAAAGCCTAAAATCATTGTGCAAACAACAAGTGATGTGGATCTCTTGGAGGATGGTTATAGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAATGCACAACTCCGGGTTGCAATGTTCGGAAGCATGTTGAAAGGGTTTCAACGGATCCAAAAGCTGTATTGACAACATATGAAGGAAAACATAATCATGATGTACCAGCAGCTAAGACTAACAGTCATAACCTTGCTAGCAATAATAGTGCATCACTACTAAAATCACAAAATGCCATACCTGAAATGCAGAATTTCAACAGAAGGGGTCAATATCAGCCTTCAGCAGTGGCACATCTAAGATTGAAGGAAGAGCATATATAA 1161 0.4289 MVGGGNGEWPSGGGFSPGPMTLLSNLFGDNDDIKSFSELLAGDTLDVEHGGGGGRSGGGLSPLAMFTAPPQQALAQAYSNAQIQSEHPFSASLVPNSTSLSQVPSITFNNIAQQLIPNSVEYSSNSEQRLQKSSSVNVDKANDDGYNWRKYGQKQVKGCEFPRSYYKCTHPSCLVTKKVERDPIDGHVTAIIYKGEHIHQRPRPSKLTNDNSSVQQVLSGTSDSEEEGDHETEVDDEPGLKRRKTEAKLLNSTLSHRTVSKPKIIVQTTSDVDLLEDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERVSTDPKAVLTTYEGKHNHDVPAAKTNSHNLASNNSASLLKSQNAIPEMQNFNRRGQYQPSAVAHLRLKEEHI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02933 386 Gene3D WRKY domain 126 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g02933 386 Gene3D WRKY domain 259 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g02933 386 FunFam WRKY transcription factor 129 203 - -
Mepo2g02933 386 ProSiteProfiles WRKY domain profile. 137 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g02933 386 MobiDBLite consensus disorder prediction 205 222 - -
Mepo2g02933 386 ProSiteProfiles WRKY domain profile. 270 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g02933 386 FunFam WRKY transcription factor 33 262 328 - -
Mepo2g02933 386 SUPERFAMILY WRKY DNA-binding domain 142 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g02933 386 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 98 360 IPR044810 GO:0003700
Mepo2g02933 386 MobiDBLite consensus disorder prediction 195 243 - -
Mepo2g02933 386 Pfam WRKY DNA -binding domain 276 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g02933 386 Pfam WRKY DNA -binding domain 143 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g02933 386 SMART WRKY_cls 275 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g02933 386 SMART WRKY_cls 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g02933 386 SUPERFAMILY WRKY DNA-binding domain 267 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02933 Mepo-Chr2 39108146 39111652 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo2g02933 WRKY 1.6e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02933 2 39108146 39111652 Mepo2g02933 2 39108146 39111652 ECH