Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02899 ATGTCAGAGGTAAAAGACCCTGCGATAAAGCTATTTGGAAGGACAATTCCGCTTCTTCCACTGATCATCCCTACCAATGACTCTTCATCTCCCTCTTCTTCTCCGCCAGAATTCACCTCTGCAATACAACATGAAACTGAGGAACCATCAAGGAAAGAACTAATCACAGCACAAGATGATGAAGCTTCGCAACAAACCGCCGAGGATTTAAGAGCTCCTATAACATCTTCAGTTGTGCTTGAGAATCCTCCTAAGACTCCATCAGCTGAAACTGAGAATTCGTTATTGAAATCTTCTACAAATGTAGAACAAAGCGAGACTAGTGTTTCTGAAGAAAAAACTCTGAAGAAACCCGACAAAATAATTCCATGCCCGCGATGCAATAGCATGGATACCAAATTTTGTTACTTCAACAATTACAATGTCAACCAACCCCGTCATTTTTGTAAGAAATGTCAAAGATACTGGACTGCAGGAGGAACAATGAGAAATGTTCCTGTTGGAGCTGGTCGCCGCAAGAACAAGAACTTATCTGCCTCGCATTATCGACACTTGATAATTCCAGAGGGAGCTAAACTTAATTCCCCTAATGGATTACATAGTTTGGGAAATGGAGCAGCTGTTTTGACGTTTGATTCAAATCCTCCGCTTTGTAACCCCATGACTTCTGTATTGAACATCGCTGAAAGAACTCAAAATTGTGTGTCAAATGGTTTTCATCATGCAAGTTCGTATGGTGGGGAAAATGATCACTCAATTGGAGTTTCAGTTACAGCTTCAAATTCATCAGAGAGGAAAGGCCACATCGGCACAAATGGGTTAGTGGATAAAGGAGTTGAAGGTTTCCCTCCTCAGTTACAACATATTCCAAGTCCCTTTTTGCCTTATACATGGAATTCTGCAATGCCTCCTCCTACCTTTTGTCCACCAAACTATCCATTAGCATTCTATACTCCAGTAACTCCACCTGCATATTGGGGTTGTATGCCACCTCCATGGAATATACCATGTATCTCACCAGGAAGTGTTTCTGTTAATCAAAGTGACTATGCTCATAGTTCTGTCCCGACTTTGGGGAAACACTCAAGGGATGGAAACATCATTACATCAGTCAACTCACCAAAAGAAAAGCCTGAAAATGAACACAATAGTACTGAAAGCAGCGTTTTGATCCCAAAGACACTTAGATTTGATGATCCAAGTGAAGCTGCAAAGAGTTCATTATGGTCAAAGCTTGGGATCAATAATGACAAAGCCAATTCTCTCAATGGAGGAAGCATGTTCAATGGATTTCAGTCCAAGGGAAAGGACATGAATCACTCAGTTGAAACGTCACCGCTGATGTATGCCAACCCTGCGGCTTTATCGCGGTCTCGTACCTTCCATGAGGAAACCTAA 1398 0.4177 MSEVKDPAIKLFGRTIPLLPLIIPTNDSSSPSSSPPEFTSAIQHETEEPSRKELITAQDDEASQQTAEDLRAPITSSVVLENPPKTPSAETENSLLKSSTNVEQSETSVSEEKTLKKPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKNLSASHYRHLIIPEGAKLNSPNGLHSLGNGAAVLTFDSNPPLCNPMTSVLNIAERTQNCVSNGFHHASSYGGENDHSIGVSVTASNSSERKGHIGTNGLVDKGVEGFPPQLQHIPSPFLPYTWNSAMPPPTFCPPNYPLAFYTPVTPPAYWGCMPPPWNIPCISPGSVSVNQSDYAHSSVPTLGKHSRDGNIITSVNSPKEKPENEHNSTESSVLIPKTLRFDDPSEAAKSSLWSKLGINNDKANSLNGGSMFNGFQSKGKDMNHSVETSPLMYANPAALSRSRTFHEET 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02899 465 Pfam Dof domain, zinc finger 120 176 IPR003851 GO:0003677|GO:0006355
Mepo2g02899 465 MobiDBLite consensus disorder prediction 26 43 - -
Mepo2g02899 465 MobiDBLite consensus disorder prediction 79 108 - -
Mepo2g02899 465 ProSiteProfiles Zinc finger Dof-type profile. 122 176 IPR003851 GO:0003677|GO:0006355
Mepo2g02899 465 MobiDBLite consensus disorder prediction 354 390 - -
Mepo2g02899 465 MobiDBLite consensus disorder prediction 354 374 - -
Mepo2g02899 465 MobiDBLite consensus disorder prediction 44 58 - -
Mepo2g02899 465 ProSitePatterns Zinc finger Dof-type signature. 124 160 IPR003851 GO:0003677|GO:0006355
Mepo2g02899 465 PANTHER CYCLIC DOF FACTOR 2 1 464 IPR045174 GO:0003700|GO:0006355
Mepo2g02899 465 MobiDBLite consensus disorder prediction 26 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02899 Mepo-Chr2 38774195 38777594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02899 1 464 C2C2-Dof Transcription Factor Family AT3G47500 40.000 5.76e-85 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo2g02899 zf-Dof 9.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02899 - - gmx:100813315 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02899 2 38774195 38777594 Mepo2g02899 2 38774195 38777594 ECH
Mepo2g02899 2 38774195 38777594 Mepo5g03188 5 39023401 39026565 ECH