Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02367 ATGAAGATCCAGTGTGATGCATGTCACAAACAAGAGGCCTCCTTGTTCTGCCCTGCAGATGAAGCAGCTCTCTGCAATCAATGTGATCGCAATATCCACTATGCCAACAAGCTCTCTGCTAAACACAAACGCTTCACTCTTCACCACCCCACTTCCAAAGGCACCCCTCTCTGTGATATCTGCAAGGAGAGGCGTGCATATCTATTTTGCAAAGAAGACAGAGCAATACTTTGCAGGGAATGTGACATTCCTATCCATGAAATCAACAAACTTACCAAGCAACACAACAGGTTTCTTCTTACAGGCGTAAAGATCGGTGCTTCTTCTTCCTATTCAAACCCAACAACTTCCAATGGCTCAGAACTAAAAACCTCAAGTCCAAGACCAAGTTCATTTTCCAGTGAAAATAATAGTTGTTCTCAAAGTTCTTTCAAAGAGAACATGGCTTGTGACGCAGTTTCAACCAGTAGCATTTCCGAATACTTGATTGAAACAATTCCTGGTTACTGCATGGAAGACCTTTTTGATGCTTCTTTTGCACCTAATAATGTTTTCTGTAAGGATTATTATGGACAGAACCAAGATCTTCAAGTTATAAACATGTCTGACTGGGTACCACAATCTCAAGTTAGATTCCCTCAGCATAGTGCTAATTCGAATGTTCCCCAGATTCATTCTTTAGACGGGGTTATGAAAATGCAACATACTAAAGCTGTTGAAGGATACAAAGTTCCTACCACTAGTCCTTCATTCATCAAACAATGTAGAGGCACTCGTTAA 780 0.409 MKIQCDACHKQEASLFCPADEAALCNQCDRNIHYANKLSAKHKRFTLHHPTSKGTPLCDICKERRAYLFCKEDRAILCRECDIPIHEINKLTKQHNRFLLTGVKIGASSSYSNPTTSNGSELKTSSPRPSSFSSENNSCSQSSFKENMACDAVSTSSISEYLIETIPGYCMEDLFDASFAPNNVFCKDYYGQNQDLQVINMSDWVPQSQVRFPQHSANSNVPQIHSLDGVMKMQHTKAVEGYKVPTTSPSFIKQCRGTR 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02367 259 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Mepo2g02367 259 CDD Bbox1_BBX-like 5 47 - -
Mepo2g02367 259 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 226 - -
Mepo2g02367 259 CDD Bbox1_BBX-like 57 100 - -
Mepo2g02367 259 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mepo2g02367 259 Gene3D Classic Zinc Finger 1 94 - -
Mepo2g02367 259 MobiDBLite consensus disorder prediction 109 142 - -
Mepo2g02367 259 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mepo2g02367 259 SMART bboxneu5 53 100 IPR000315 GO:0008270
Mepo2g02367 259 FunFam B-box zinc finger protein 21 1 98 - -
Mepo2g02367 259 Pfam B-box zinc finger 56 96 IPR000315 GO:0008270
Mepo2g02367 259 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02367 Mepo-Chr2 33441272 33442587 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mepo2g02367 zf-B_box 2.2e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02367 2 33441272 33442587 Mepo2g02367 2 33441272 33442587 ECH
Mepo2g02367 2 33441272 33442587 Mepo5g00963 5 9360167 9363046 ECH