Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02361 ATGGAAAAGATGTATTCAACACAATTAGGGGAAGAAGAAGTGTTAAAGGGTCTAAAATGTCAAGACTGTGGGAACCAAGCAAAGAAGGATTGTGCATACTCAAGGTGCAGAAGTTGCTGCAAAAACAAAGGTTTTAACTGCCATACACATATCAGAAGCACTTGGATTCCTGCCGATAGAAGGCGTCACAGAATGGATCATCCTTCTGATCAGCACCACCTTCATGAACATAAAAGGCACAAGCATATCAACACTATTTCAAGTTCTGATGAGTTCAAATTTCCGGCTGTTACGAGTTCCATGGCCACATTGACATGTATTCAGGTGCGCTCTATGGACGGAACGGTTAATGAAACGGCCTATCAAACAAGTGTAGAAATTGGAGGACATGTATTTAGTGGTATTCTTTACGATCAAGGCCCTGATCAACAAAGCTTCAATAATATAGACCCTCTTGATCATCAACAAAATCTCAATCTTTTTAGTAGTAATGCAATCCACACAGGTGATGATGGTGCAAGTGCAAGTGCAACTATAGCTGCTACTGCTTCTCATCGTCGCTTTTTATTTCCTCCACCGCAACCGTTGCCTTCTTTCAGGCCCGGCTATCGAGGAGTTTTGCGAATGAGTGTATTTTCTCTAAGAGGATGTTGA 654 0.4174 MEKMYSTQLGEEEVLKGLKCQDCGNQAKKDCAYSRCRSCCKNKGFNCHTHIRSTWIPADRRRHRMDHPSDQHHLHEHKRHKHINTISSSDEFKFPAVTSSMATLTCIQVRSMDGTVNETAYQTSVEIGGHVFSGILYDQGPDQQSFNNIDPLDHQQNLNLFSSNAIHTGDDGASASATIAATASHRRFLFPPPQPLPSFRPGYRGVLRMSVFSLRGC 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02361 217 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 11 184 IPR007818 GO:0003700|GO:0006355
Mepo2g02361 217 NCBIfam LRP1 C-terminal domain 93 141 IPR006511 -
Mepo2g02361 217 Pfam Domain of unknown function (DUF702) 17 142 - -
Mepo2g02361 217 NCBIfam putative zinc finger domain, LRP1 type 19 61 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02361 Mepo-Chr2 33397118 33398732 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mepo2g02361 DUF702 6e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02361 2 33397118 33398732 Mepo2g02361 2 33397118 33398732 ECH
Mepo2g02361 2 33397118 33398732 Mepo5g00935 5 9076103 9077647 ECH
Mepo3g07891 3 91919205 91920917 Mepo2g02361 2 33397118 33398732 ECH