Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02358 ATGGATCATCGCACTCTTCTTCTCTTCGTCGCTCTTTTCATCTTCTCCGTCTCGGCATTCTCTACGCCGGACGAAGGAGAAGATCCAATAATCCGACAGGTGGTCGACGAAGAAGGAGTGCGGTTGGGAGCAGAGCATCACTTTAATCTATTTAAACATAAGTTTGGGAAGGTTTATTCTTCCAAGGATGAACATGATTACAGGTTCAAAATCTTTAAGTCTAATCTAAACCGTGCTAAGAGGCATCAATTGATGGATCCTTCGGCGGTTCATGGTGTTACAAGATTCTCCGATCTTACCCCGAGAGAGTTTCGTCAGAGCGTTTTGGGATTGAGAGGGGTGGGGTTGCCAAAAGATGCTAATGCAGCCCCGATCCTTCCGACAGATAATCTTCCGAAGGACTTTGATTGGAGAGAAAAAGGAGCAGTTACTGCTGTTAAAAATCAGGGCTCGTGTGGATCATGTTGGAGTTTCAGCACTACTGGTGCACTTGAAGGTGCTCACTTTCTCTCGACCGGAAAACTTGTCAGTCTTAGCGAGCAACAACTTGTTGATTGTGATCATGAGTGTGATCCAGAGCAACCGGGTTCTTGTGATGCCGGGTGCAATGGTGGTCTGATGAATAGTGCTTTTGAGTACATTTTAAAATCCGGTGGGGTGATGCGCGAAGAAGACTATCCTTATTCTGGTACTGATCGTGGAGCATGCAAGTTTGACAAGAAAAAAATTGCAGCATCAATTGCAAATTTCAGCGTTGTTTCACTTGATGAAGACCAGATTGCCGCTAATCTTGTCAAGAACGGTCCTCTTGCGATTGCCTTAAATGCAGTATACATGCAAACATACGTTGGAGGAGTATCATGCCCATACATATGCTCAAAGAGATTGGATCATGGAGTGTTACTGGTGGGATATGGATCTGGAGCCTATTCACCTATTAGGATGAAAGAGAAGCCATATTGGATAATTAAAAACTCATGGGGTGAGACCTGGGGAGAAAATGGATACTACAAAATATGCAGGGGACGAAATATCTGCGGAGTGGACTCCATGGTTTCTACTGTGGCTGCCGTTCATACTACTACTCAATAG 1092 0.446 MDHRTLLLFVALFIFSVSAFSTPDEGEDPIIRQVVDEEGVRLGAEHHFNLFKHKFGKVYSSKDEHDYRFKIFKSNLNRAKRHQLMDPSAVHGVTRFSDLTPREFRQSVLGLRGVGLPKDANAAPILPTDNLPKDFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGAHFLSTGKLVSLSEQQLVDCDHECDPEQPGSCDAGCNGGLMNSAFEYILKSGGVMREEDYPYSGTDRGACKFDKKKIAASIANFSVVSLDEDQIAANLVKNGPLAIALNAVYMQTYVGGVSCPYICSKRLDHGVLLVGYGSGAYSPIRMKEKPYWIIKNSWGETWGENGYYKICRGRNICGVDSMVSTVAAVHTTTQ 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02358 363 CDD Peptidase_C1A 132 355 IPR039417 -
Mepo2g02358 363 Pfam Cathepsin propeptide inhibitor domain (I29) 48 104 IPR013201 -
Mepo2g02358 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 296 306 IPR025660 -
Mepo2g02358 363 SMART pept_c1 131 356 IPR000668 GO:0006508|GO:0008234
Mepo2g02358 363 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 45 349 IPR013128 GO:0008234
Mepo2g02358 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 320 339 IPR025661 -
Mepo2g02358 363 PRINTS Papain cysteine protease (C1) family signature 298 308 IPR000668 GO:0006508|GO:0008234
Mepo2g02358 363 PRINTS Papain cysteine protease (C1) family signature 320 326 IPR000668 GO:0006508|GO:0008234
Mepo2g02358 363 PRINTS Papain cysteine protease (C1) family signature 149 164 IPR000668 GO:0006508|GO:0008234
Mepo2g02358 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 149 160 IPR000169 -
Mepo2g02358 363 SUPERFAMILY Cysteine proteinases 46 355 IPR038765 -
Mepo2g02358 363 Pfam Papain family cysteine protease 131 354 IPR000668 GO:0006508|GO:0008234
Mepo2g02358 363 FunFam Cysteine protease RD19A 29 356 - -
Mepo2g02358 363 Gene3D Cysteine proteinases 27 356 - -
Mepo2g02358 363 SMART Inhibitor_I29_2 48 104 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02358 Mepo-Chr2 33369450 33371556 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02358 2 33369450 33371556 Mepo2g02358 2 33369450 33371556 ECH
Mepo3g07160 3 85277481 85283316 Mepo2g02358 2 33369450 33371556 ECH
Mepo4g00300 4 4672144 4677071 Mepo2g02358 2 33369450 33371556 ECH