Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01934 ATGGGGATGGATTCTTCTAGTGGACAACAACAGCAAATGTCTAACCAGTCATTGGAGAGCATGTTAACATGTTCAAAAGGAGAACAAGACAAAAAGCCAAAACCTCCTCAACCAGAAGCTCTAAAATGTCCAAGATGTGACTCAAACAACACCAAATTTTGCTACTACAACAATTACAGTCTCTCTCAACCAAGATATTTCTGCAAGTCTTGTAGGAGATATTGGACTAAAGGTGGTACACTAAGAAATGTTCCTGTTGGTGGGGGGTGTAGAAAGAACAAAAGATCATCATCAGCATCATCAAAGAGGTCTCAAGATCAACCATTTCAAACCAACCCAAATCCACTCACTTGTTTCCCTTCATTGTCCTATGATTCCAATGATCTCACACTAGCATTGGCTAGGCTTCAAAAGGGTCAACTTGGATTTGATCATGAACATGATTTTTCCATTTTAGGAAACCAAACCAACACCTCATGTGGCATTCTTAACAATCATGGCATGAACCATTCCTCAAACAACCAAGGATTCTTTGAAGCACTTATGGGATCTCAAAACAATGTGCAGAATCTTTACTACATGGGAGAGGTTGATAATGGCAATGCTAATGGCAATGCTAATGGTGAGATGATGTTACCTTATGATCATGAAATGAGCATTGCAACTACTCAAGCAGTTACAGTTACTACTATGAAACAAGAAATGTGCAATGTTAGGGAACAGAATGAAAATAGGGTTTTGTTAGGTTTTCCATGGCAGTTCAATAATGGAGACACAAATATGGCTGAAATGGATCATTTAGGAAGAGCTGGTTGGAATGGTCTCACTTCATCTTGGGGGCATGGCCTTCTCAATAGCCCCCTAATGTAG 870 0.3966 MGMDSSSGQQQQMSNQSLESMLTCSKGEQDKKPKPPQPEALKCPRCDSNNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSASSKRSQDQPFQTNPNPLTCFPSLSYDSNDLTLALARLQKGQLGFDHEHDFSILGNQTNTSCGILNNHGMNHSSNNQGFFEALMGSQNNVQNLYYMGEVDNGNANGNANGEMMLPYDHEMSIATTQAVTVTTMKQEMCNVREQNENRVLLGFPWQFNNGDTNMAEMDHLGRAGWNGLTSSWGHGLLNSPLM 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01934 289 MobiDBLite consensus disorder prediction 1 42 - -
Mepo2g01934 289 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Mepo2g01934 289 MobiDBLite consensus disorder prediction 86 114 - -
Mepo2g01934 289 Pfam Dof domain, zinc finger 40 95 IPR003851 GO:0003677|GO:0006355
Mepo2g01934 289 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Mepo2g01934 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 217 IPR045174 GO:0003700|GO:0006355
Mepo2g01934 289 MobiDBLite consensus disorder prediction 100 114 - -
Mepo2g01934 289 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01934 Mepo-Chr2 28281121 28283101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01934 10 289 C2C2-Dof Transcription Factor Family AT2G28510 41.720 6.34e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo2g01934 zf-Dof 1.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01934 - - gmx:100799737 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03775 6 49927575 49929818 Mepo2g01934 2 28281121 28283101 PCT