Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00677 ATGGTTTTTACTTCCATACCAGCAGCTTATCTTGATGCAGCCAACTGGCAACAGCAGCAACAGAATAATCATCAACAACCAGGAAACGGCGGCTCCGTTTCTCAACAACTGCTTCAGACACCACCACCACCACCACAGTCACAATCTCAACCTCATGGAGGAGGATCCACCGGCTCAATTAGGCCAGGATCGATGTCCGATAGGGCAAGGATGGCAAACGTGCCTATGCCGGAGGCAGCACTGAAATGTCCACGTTGTGAATCAACCAACACAAAATTTTGCTACTTCAACAACTACAGTCTCTCTCAGCCCAGACACTTCTGCAAGACTTGCAGAAGATACTGGACAAGAGGCGGCGCTCTAAGGAACGTCCCGGTTGGTGGAGGCTTCCGGAGAAACAAGAGATCAAGCAAAAGTAGCAACAATGGAAACTCAACAAAGTCTCCGGCTAGCTCTGACCGCCAAACGGGGAGTGCTAGTTCAACAAACTCAATTACCTCCAATAACAATATCCACTCTTCTGCCGATATATTAGGCCTTACACCTCAAATGTCATCATTGAGGTTCATGACACCTTTACATCATAACTTCAGTAACCCTAATGATTTCGGAGGAGGAGGAGATTTAGGGTTAAACTATGGTTTTAGTTACATGGGAGGAGTAGGTGATTTGGGAAGTGCTTTAGGAGGTAATTCAATTTTATCATCAAGTGGTTTGGAGCAATGGAGGATGCCAATGTCAATGACTCATCAACAGCACCAATTTCCTTTTTTGGCTAATTTGGAGGGTTCAAATAGTAATTTGTACCCTTTCGAAGGAAATGTTCAAAATCATGAAATGATAACTAGTGGTGGATATGTGAGGCCAAAAGTGATTTCAACTTCTGGAATTATGACTCAACTTGCTTCTGTGAAAATGGAAGATAGTATTAATAGGGGCTTTTTGGGAATTAGCACCGGCACCGGTAATAGTAATCAAGGAAGTGAACAATTTTGGAATAGTGCTGTTGTTACTGGTAATTCTGCAGCTAATTGGACTGATCATGTTTCTGGTTTTAGCTCTTCTTCTAATACTACTAGTAACCAGATGTAG 1092 0.4322 MVFTSIPAAYLDAANWQQQQQNNHQQPGNGGSVSQQLLQTPPPPPQSQSQPHGGGSTGSIRPGSMSDRARMANVPMPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQMSSLRFMTPLHHNFSNPNDFGGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQWRMPMSMTHQQHQFPFLANLEGSNSNLYPFEGNVQNHEMITSGGYVRPKVISTSGIMTQLASVKMEDSINRGFLGISTGTGNSNQGSEQFWNSAVVTGNSAANWTDHVSGFSSSSNTTSNQM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00677 363 ProSitePatterns Zinc finger Dof-type signature. 83 119 IPR003851 GO:0003677|GO:0006355
Mepo2g00677 363 MobiDBLite consensus disorder prediction 17 37 - -
Mepo2g00677 363 MobiDBLite consensus disorder prediction 122 168 - -
Mepo2g00677 363 Pfam Dof domain, zinc finger 80 135 IPR003851 GO:0003677|GO:0006355
Mepo2g00677 363 ProSiteProfiles Zinc finger Dof-type profile. 81 135 IPR003851 GO:0003677|GO:0006355
Mepo2g00677 363 MobiDBLite consensus disorder prediction 133 168 - -
Mepo2g00677 363 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 43 265 IPR045174 GO:0003700|GO:0006355
Mepo2g00677 363 MobiDBLite consensus disorder prediction 17 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00677 Mepo-Chr2 8158073 8159741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00677 1 308 C2C2-Dof Transcription Factor Family AT2G37590 41.642 3.09e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo2g00677 zf-Dof 3.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00677 - - pvu:PHAVU_010G013500g 313.153