Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03551 ATGTCACAAGGACTAAAAAATAAGATGAGCATTGTGTATACTCAAGCTTTCAACTACTCTGAAGGTGGTTCAATGAAGAACACAGAAATGGATTCAAAATTTGGTTACTCACAAACACAACAACATTGTCTTCAAAACAATTCCGGCTTAACGCGGTATGGTTCAGCTCCAAGTTCATTACTTACAAGCCTTGTAGACACAAGCCTTGGATTTTTCAATGAAGAAACTTTCAGAAATGAGAATCAGCAGCAGCAGCATTATTCTACCTCTACAAGTTCAGAAATGGAAACCATGTTTACCAATTCTGAATCTTTGTCTGTGAAACAAGAAGAAAAGGACCCTTTCTCACATGGAATACAATACAATGATTACTCTTATGGATCTCAGAATCAGATAAATTACCAAACTCAGCAGAATCAAGGATTTCCAAATGGTTCTTTAGGTGTTGAGGGGAATGTTTTTGATGGGTCTTCTAATAATTGCTCCAATCTCATTAGGCAAAAGAGTTCTCCTGCTGAGTTTTTCTCCAATTATTCGGTTGAGAGTGGCTTAGGAAGTGTTAATGGACAAGCTACTACATCAACTAGTGGATTGCATGGTACTTTGAACTTCTCATCTAGAACATCCTCTTGCTCTATCAAGATGCCACTAATTGTTGAAAATGAACATGAAGCTCTTCAACCAAATTGTATTAAAAGTAGAAACATGGGAAATGAAAATGGTATCACAAAATGTTACATGCCTAGCTTCACTAATGACTACTGGGATAATTCTACATTCAGTGCTCCAAAAAATGCTACTAATAAGGGTGAATTCATGTTTTCCACTTCAAATGCTTTGGAAACTCAGAATGTAGATTTTGGATACCAAAAACTTGGTTTGACCCATCATTTAAGTCTGCCAAGCTCTTCTTCCAAGATGGCTGCTATGGAGAAGTTTTTACACCTTCAAGGATCTGTTCCATGCAAAATCCGTGCCAAAAGAGGCTTTGCCACTCACCCTAGAAGCATTGCAGAGAGGGAAAGAAGAATAAGAATTAGTGCAAGAATAAAAAAACTGCAAGACCTTTTCCCAAATGCAGATAAGCAAACTAGCACGGCTGATATGTTGGATGAAGCAGTTGCGTACATTAAAGACCTCAGGAAACAACTTAAGGTACTAGCAGAGACCAAGGCAAAGTGCAGTTGTACAAGTAATTAG 1200 0.3775 MSQGLKNKMSIVYTQAFNYSEGGSMKNTEMDSKFGYSQTQQHCLQNNSGLTRYGSAPSSLLTSLVDTSLGFFNEETFRNENQQQQHYSTSTSSEMETMFTNSESLSVKQEEKDPFSHGIQYNDYSYGSQNQINYQTQQNQGFPNGSLGVEGNVFDGSSNNCSNLIRQKSSPAEFFSNYSVESGLGSVNGQATTSTSGLHGTLNFSSRTSSCSIKMPLIVENEHEALQPNCIKSRNMGNENGITKCYMPSFTNDYWDNSTFSAPKNATNKGEFMFSTSNALETQNVDFGYQKLGLTHHLSLPSSSSKMAAMEKFLHLQGSVPCKIRAKRGFATHPRSIAERERRIRISARIKKLQDLFPNADKQTSTADMLDEAVAYIKDLRKQLKVLAETKAKCSCTSN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03551 399 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 56 392 - -
Mepo1g03551 399 Pfam Helix-loop-helix DNA-binding domain 336 380 IPR011598 GO:0046983
Mepo1g03551 399 Gene3D - 332 398 IPR036638 GO:0046983
Mepo1g03551 399 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 330 380 IPR011598 GO:0046983
Mepo1g03551 399 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 332 394 IPR036638 GO:0046983
Mepo1g03551 399 FunFam Transcription factor bHLH130 family 331 399 - -
Mepo1g03551 399 Coils Coil 370 390 - -
Mepo1g03551 399 SMART finulus 336 386 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03551 Mepo-Chr1 41262181 41267572 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g03551 HLH 4.5e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02944 5 35984253 35987710 Mepo1g03551 1 41262181 41267572 ECH
Mepo1g03551 1 41262181 41267572 Mepo1g03551 1 41262181 41267572 ECH