Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo1g03524 | ATGTACATCAAGGAAATCTGCCTCGAAGGCTTCAAATCCTACGCAACACGTACCGTTGTTCCCGGGTTCGACCGATTTTTCAACGCAATCACCGGTTTAAACGGTTCCGGCAAATCGAACATTCTCGATTCGATTTGCTTCGTTCTTGGAATCACCAATTTGACACAGGTTCGTTGTTCCAATCTTCAAGAGCTTGTTTATAAACAAGGTCAAGCGGGAATTACCAAAGCTACTGTTTCAATTGTGTTTGATAATTCTGAAAGGGGTCGCAGTCCGCTTGGGTATGAAGCTCATTCTGAAATTACCGTCACTAGACAGATTGTGGTTGGAGGTAGGAACAAGTATTTGATAAATGGGAAACTTGCGCAGCCTAGTCAAGTTCAAAACCTTTTCCATTCCGTACAACTAAATGTGAACAATCCACATTTCCTCATAATGCAAGGGAGGATTACTAAGGTTTTAAATATGAAACCCCCAGAGATATTGTCTATGCTTGAGGAAGCTGCAGGGACAAGAATGTACGAGACAAAGAAAGAGGCTGCTCTAAAAACTCTTGAGAAGAAGCAGAGTAAGGTTGATGAGATCAACAAGCTTCTTGATCAGGAGATACTTCCAGCTTTGGAGAAGTTAAGGAAAGAAAGGACACAGTACATGCAATGGGCTAATTGTAACGCTGAGTTAGATAGGCTGAGAAGATTCTGTATTGCTTTTGAGTATGTTCAAGCGGAGACTATCAAAGACAATGCTATTTCTGAGGTGGAACAAGTAAAAGCCAAGATAACTGAGATTGATGACATGGCTAAGACAACTATGGTGGATGTTAAAGAAATGGAGACCAAAATAGCTCAGTTGACTGCTGAGAAGGAAGCAAGCATGGGCGGAGAAATGAAATCTCTGTCGGATAAGGTAGATGAACTTTCCCAGCATCTTGTGAAGGAAACGTCTGTACTAAATAATAAAGAAGACACTCTGAGGAGCGAAGAAGTCAACAAAGGAAAAATTGTTAAAAATATTGAAGAATTGAAGCAATCTGTAGAAGAGAAGGCCTCTGCCATTAAAAAGGCTGAAGAAGGAGCAGCTGATTTGAAAAGTAGAGTTGAGGAGCTCTCAAAGAGCCTGGAGGAGCATGAAAAGGAATATCAGGGTGTTTTAGCTGGCAAGAGCAGTGGCAACGAGGAGAAATGCTTAGAGGATCAACTAGGTGATGCAAAGATAGCAGTTGGGAGTGCTGAAACAGAATTGAAACAGCTGAAAACTAAAATTAGCCATTGCGAGAAGGAACTGAAAGAGAAAAAGAATCAATTAAAGTCAAAACGGGATGAAGCTACTTCTGTGGAAAATGAGCTCAAAGCTAGAAGGAAGGATGTTGAAAATATCAAAACAGGATTGGAATCTCTTCCTTACAAAGAGGGTGAAATGGAAGCTTTGCAAAAGGAGCGCGAATCTGAGAGGGATTGTGTGCAAAGGTTGAAGGATGAAATACGCAATCTTTCAGCATACTTGTCTAATGTTGAATTTTCATACCATGATCCCGTCAAGAACTTTGATAAGTCAAAGGTGAAGGGTGTTGTTGCAAAACTCATCAAAGTGAAAGACAGGTCCACCGTGACTGCCCTAGAGGTTACAGCGGGTGGAAAGTTGTACAATGTTGTAGTTGACACAGAAAGTACTGGAAAACAACTACTACAGAATGGCAAACTTAGAAAAAGAGTTACAATTATACCTCTGAACAAAATACAATCCTATACTGTTCCCTCAAGAGTTCAACAAGCTGCTGTTAGATTGGTGGGCAAGGAGAATGCCGAAATTGCACTTTCTTTGGTTGGTTATCAAGAAGAATTGAAGAATGCAATGGAATACGTCTTTGGCTCAACCTTTGTTTGCAAAACTGTGGATGCTGCAAAGGAGGTGGCATTTAGTCGGGAGGTTCACACCACAAGCGTCACTCTTGAAGGAGATATATTTCAGCCAAGTGGTCTACTGACTGGGGGAAGCCGGAAGGGAAGCGGTGATCTGTTGAGGCAACTTCATGCTGTGGCTGAAGCAGAATCAAAACTTTCAGTGCATCAAAGTAGGTTATCAGAGATTGAGGCAAAGATCACACAGCTTCTTCCTCTTCAGAAAAAATTTAAAGACCTCAAAACACAATTAGAACTCAAGTCATATGATCTTTCATTGTTTCAGAAAAGAGCTGAGCAAAACGAGCATCATAAGCTTGGTGAATTAGTGAAGAAGATTGAGCAAGAACTTGAAGAAGCAAAATCTGCAGTCAAAGAAAAGCAACTTTTATATGAGAACTGTGTCAAGGCTGTTTCATCACTTGAGAAAACAATCAAAGAACATGACAATAATCGTGAAAGTAGGCTAAAAGGTTTGGAGAAAAAGATAAAGTCGATTAAATCACAAATGCAGTCATCTTCAAAAGACCTAAAGGGACATGATAATGAAAAGGAGAGGCTTGTAATGGAAATGGAAGCTGTTATCCAGGAGCAAGCTTCCTTGGAGAATCAATTAGCATCAATGAGTACACAGATTAGTAATCTTGCCTCAGAAGTAGAAGAACAAAAATCTACAGTTGCTGCTGCGAGGAATAATCTTGATGAAGTTCAGTCAGAGCTGAATGCAGTTCGTCAGAAAATGAAGCAGTGTGATAAGGAAATCAGTGGCATTGTTAAAGAGCAGAAAAAGCTTGAACATAAACTTAGTGAGAGTAATCTTGAAAGGAAGAGGATGGAAAACGAGGTAAAACGAATGGAAATGGAACAGAAAGACTGTTCTGTGAGGGTGGATAAATTGATAGAGAAGCATGCATGGATTGCTTCTGAAAAACAGTTGTTTGGTAAAAGTGGGACTGACTATGATTTCTCTTCTCGTGATCCTCGTAAAGCAAGGGAAGAACTTGAGAAGCTTCAGGCTGAACAATCGGGGCTTGAGAAAAGGGTGAACAAGAAAGTAATGGCAATGTTTGAGAAGGCAGAGGACGAGTACAATGACTTGATGTCAAAGAAAAATATAATTGAGAATGACAAGTCTAAGATCAAGAAGGTGATTGAAGAGTTAGATGAGAAAAAGAAAGAGACGCTAAATGTTACCTGGACCAAAGTGAACACTGACTTTGGATCCATATTTTCTACACTATTACCGGGCACAATGGCCAAGCTAGAACCTCCAGAAGGATTCAGCTTTCTTGATGGTCTTGAGGTTAAAGTTGCATTTGGAAGTGTATGGAAACAGTCGTTGTCTGAACTGAGTGGAGGTCAGCGATCATTGCTTGCACTTTCTCTGATTCTGGCACTGCTTCTTTTCAAACCTGCTCCACTTTATATCTTGGACGAGGTTGATGCAGCTCTTGATTTGAGCCACACACAAAACATAGGGAAGATGATAAAAAATCACTTTCCACACTCCCAGTTTATTGTGGTGTCACTAAAGGAAGGCATGTTCAATAATGCAAATGTTCTTTTCCGGACAAAATTTGTCGATGGTGTTTCAACCGTGCAGCGAACTGTAGCTAAGCAAAACAAGTGA | 3528 | 0.4045 | MYIKEICLEGFKSYATRTVVPGFDRFFNAITGLNGSGKSNILDSICFVLGITNLTQVRCSNLQELVYKQGQAGITKATVSIVFDNSERGRSPLGYEAHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVDEINKLLDQEILPALEKLRKERTQYMQWANCNAELDRLRRFCIAFEYVQAETIKDNAISEVEQVKAKITEIDDMAKTTMVDVKEMETKIAQLTAEKEASMGGEMKSLSDKVDELSQHLVKETSVLNNKEDTLRSEEVNKGKIVKNIEELKQSVEEKASAIKKAEEGAADLKSRVEELSKSLEEHEKEYQGVLAGKSSGNEEKCLEDQLGDAKIAVGSAETELKQLKTKISHCEKELKEKKNQLKSKRDEATSVENELKARRKDVENIKTGLESLPYKEGEMEALQKERESERDCVQRLKDEIRNLSAYLSNVEFSYHDPVKNFDKSKVKGVVAKLIKVKDRSTVTALEVTAGGKLYNVVVDTESTGKQLLQNGKLRKRVTIIPLNKIQSYTVPSRVQQAAVRLVGKENAEIALSLVGYQEELKNAMEYVFGSTFVCKTVDAAKEVAFSREVHTTSVTLEGDIFQPSGLLTGGSRKGSGDLLRQLHAVAEAESKLSVHQSRLSEIEAKITQLLPLQKKFKDLKTQLELKSYDLSLFQKRAEQNEHHKLGELVKKIEQELEEAKSAVKEKQLLYENCVKAVSSLEKTIKEHDNNRESRLKGLEKKIKSIKSQMQSSSKDLKGHDNEKERLVMEMEAVIQEQASLENQLASMSTQISNLASEVEEQKSTVAAARNNLDEVQSELNAVRQKMKQCDKEISGIVKEQKKLEHKLSESNLERKRMENEVKRMEMEQKDCSVRVDKLIEKHAWIASEKQLFGKSGTDYDFSSRDPRKAREELEKLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWTKVNTDFGSIFSTLLPGTMAKLEPPEGFSFLDGLEVKVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGKMIKNHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAKQNK | 1175 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo1g03524 | 1175 | Coils | Coil | 178 | 198 | - | - | |
| Mepo1g03524 | 1175 | FunFam | Structural maintenance of chromosomes 2 | 518 | 583 | - | - | |
| Mepo1g03524 | 1175 | PIRSF | SMC | 1 | 1156 | IPR024704 | GO:0005524|GO:0016887 | |
| Mepo1g03524 | 1175 | SUPERFAMILY | Tropomyosin | 679 | 888 | - | - | |
| Mepo1g03524 | 1175 | SMART | SMC_hinge_2 | 518 | 638 | IPR010935 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
| Mepo1g03524 | 1175 | Coils | Coil | 789 | 886 | - | - | |
| Mepo1g03524 | 1175 | Coils | Coil | 982 | 1026 | - | - | |
| Mepo1g03524 | 1175 | SUPERFAMILY | Smc hinge domain | 477 | 686 | IPR036277 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
| Mepo1g03524 | 1175 | Gene3D | - | 1 | 202 | IPR027417 | - | |
| Mepo1g03524 | 1175 | Coils | Coil | 894 | 928 | - | - | |
| Mepo1g03524 | 1175 | CDD | ABC_SMC2_euk | 1 | 156 | IPR027120 | GO:0005524|GO:0016887 | |
| Mepo1g03524 | 1175 | Gene3D | - | 461 | 590 | - | - | |
| Mepo1g03524 | 1175 | Gene3D | - | 591 | 666 | - | - | |
| Mepo1g03524 | 1175 | Coils | Coil | 335 | 386 | - | - | |
| Mepo1g03524 | 1175 | Gene3D | - | 803 | 890 | - | - | |
| Mepo1g03524 | 1175 | Gene3D | - | 994 | 1175 | IPR027417 | - | |
| Mepo1g03524 | 1175 | FunFam | Structural maintenance of chromosomes 2 | 1 | 202 | - | - | |
| Mepo1g03524 | 1175 | Coils | Coil | 729 | 766 | - | - | |
| Mepo1g03524 | 1175 | Coils | Coil | 267 | 287 | - | - | |
| Mepo1g03524 | 1175 | Coils | Coil | 407 | 455 | - | - | |
| Mepo1g03524 | 1175 | FunFam | Structural maintenance of chromosomes 2 | 995 | 1174 | - | - | |
| Mepo1g03524 | 1175 | Coils | Coil | 473 | 493 | - | - | |
| Mepo1g03524 | 1175 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 | 1 | 1173 | - | - | |
| Mepo1g03524 | 1175 | Pfam | SMC proteins Flexible Hinge Domain | 519 | 638 | IPR010935 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
| Mepo1g03524 | 1175 | Pfam | RecF/RecN/SMC N terminal domain | 2 | 1161 | IPR003395 | - | |
| Mepo1g03524 | 1175 | Coils | Coil | 679 | 699 | - | - | |
| Mepo1g03524 | 1175 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 1157 | IPR027417 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo1g03524 | Mepo-Chr1 | 40837695 | 40848347 | Proximal |