Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03521 ATGATGAATCCTACATCTTCTTACACTCATGCAGATGTTGTGAAATATAGCCCTATGATGAATCCTACATCTTCTTACACTCATGCGGATGTTTCGAAAACCTTTACGGAGGAAGGGGAAATTCGTAATCTCATAACATCTGGTCAAGCTAAAGAATGGGGCTCCGATATGCGTCTGGGAATTTCATCTGAGGAAGGATGTAAAGAACTTAAATTATCAAGTGATAGCTTGCCATATTCGGCAAATGCTTATGTTGTAGATTACAAAAATCCGCATGCAATCACAGATGTTATAAACCATGTAGAGAATGGAAAATATGGTAGTGTGACAAAGGATATTGATGCCCATATAACCCGAAAAATGCAAATATTGGGCCCTTACTTTGCTCCACATCCGAGTCTTATTAATAAATACTTGAAAGGGGTGACAGATCATGAAGAAACTCACCCTTCGGAAAATATAGAAGTTACTGGTATGTCACATCAAAATGTCATAAATTTTGATTCTGATAGGAGGCATATTCAGAAGGATGTTGCGGCACCAAAAAGAGAAAAGGATGTTCCTGCAGCACCAATTCTTGTTTTTAATCAAGTTGTATGGCCGAAACCTATTTTTCATAGAGTTGTATTGCCAAAACGGATTCAGACTCCTGCAATAAAAATGATTGAGTGGTATCATGCTCCCAATGCTTACCATGGAGAAAGTTCAGGTCTAAAACCTAAAATAAGTCTGCCTCCTACATATAGCACTAGGAAAGATAAAGGTGTATATGTTGGTGTACACAAGGAAAAAGATAACAAGGTTGGTGCTGAAGATAACAGTGTTTATGGCCGTGTACAAGAGGAAGAGGATAACAAGGTTGATGGTGAAGATACATGTGTTTATACCGGTGTACAAGAGGAAGAAGATAATAAGGTTGATGATAAAGGTAAAGGTGTCTATGTCGGTGTACAAGAGGAAGAAGATAATAAGGTTGATGCTGAAGATGACGGGCTAGAAGATATGTGGAGGGAGATGTCAATGGCAATAGAAACTTCTAAAGATGTTTCTGCAGATCCTCCACCTGAAGATGAGGAAGAAGATCCTGACTGTGATCATTCTTTCATTCTAAAAGACGATCTTGGATATGTTTGTCGTGTTTGTGGGGTTATTGACAAAGGAATTGAAACCATATTTGAGTTTCAATACAAGGTTACAAGGAGCACCAGGACTTATATGTCCGATTCGTCAAAAGCCAGAGAAAAAGTGGATGCGTTTGGAGTGAAGATTTCTTGTAGACCTCAGCAACTGGCGGTGTTAAAACAGTGGATGGATAACAAAAGTATCCTTTTCTTAGGATACAAACAGTTATCTAACATTGTGTGTGATAAAAGTAATAACAATGCAACAATATCTTGCCAAGAGATATTGCTTAAGGTTCCCTCACTTCTCATTTTAGATGAGGGACACACTCCAAGAAATGAGAATACTGAGATGGTACAGTCCCTTGCCAAAATACAAACACCAAGGAAAGTTGTATTGTCTGGAACTCTTTATCAAAATCATGTTAGGGAGGTCTTCAATGTTCTAAATCTGGTTCGGCCAAAGTTCTTGAATATGGGGACGTCTAAGCCTATTGTTCGGCGCATTCAGAGCAGGATCCATATGCCTGGTTTGAAACGATTTGATGATTTGGTTGAGAATATATTACAAAAGGATCCAGATTTTAAAAGGAAAGTTGCTGTAATTCATGATTTGCGTGAGATGACCAGCAAAATTCTTCACTACTACAGAGAAGATTTTCTTGATGAGCTTCCTGGCCTGGTAGATTTCACTGTGTTGCTGAAACTTACTCCGAGACAGAAGCACGAACTTAAGATAGTGAAGATGACACATATAAAGTTCAAAAAGTCTTCTGTAGGCAGTGCAGTGTATATGCACCCAAATTTGAAGCCCATTGCAGAAAATAATGATGAAAAATCCACATATGATCATGTAAAGATGGATGAATTTATAAAGGACTTAGATGTCGGAGAGGGAGTTAAATCGAAATTCTTTCGCAATATGCTGAACCTATGTGAATCAGCTGGGGAGAAACTTCTGGTGTTCAGTCAATACCTATTGCCTTTGAAATATTTGGAAAGGTTAGCCATGAAGTGGAAGGGTTGGAGTCTCGGAAAAGAAATCTTTGTGATTTCAGGAGAATCATCCGCTGAACAAAGAGAGTTTTCCATGGAGAAGTTTAACAATTCACCCGAGGCAAAAGTATTGTTTGGCTCAATCAGAGCATGTAGTGAGGGGATATCATTGGTTGGGGCATCTCGTGTCATCATCTTGGATGTTCATCTCAACCCATCTGTTACTCGTCAAGCTATTGGCCGTGCTTTTCGGCCAGGCCAGAAAAAGAAAGTGTTGAAATATTTCTTATTTTAG 2412 0.3881 MMNPTSSYTHADVVKYSPMMNPTSSYTHADVSKTFTEEGEIRNLITSGQAKEWGSDMRLGISSEEGCKELKLSSDSLPYSANAYVVDYKNPHAITDVINHVENGKYGSVTKDIDAHITRKMQILGPYFAPHPSLINKYLKGVTDHEETHPSENIEVTGMSHQNVINFDSDRRHIQKDVAAPKREKDVPAAPILVFNQVVWPKPIFHRVVLPKRIQTPAIKMIEWYHAPNAYHGESSGLKPKISLPPTYSTRKDKGVYVGVHKEKDNKVGAEDNSVYGRVQEEEDNKVDGEDTCVYTGVQEEEDNKVDDKGKGVYVGVQEEEDNKVDAEDDGLEDMWREMSMAIETSKDVSADPPPEDEEEDPDCDHSFILKDDLGYVCRVCGVIDKGIETIFEFQYKVTRSTRTYMSDSSKAREKVDAFGVKISCRPQQLAVLKQWMDNKSILFLGYKQLSNIVCDKSNNNATISCQEILLKVPSLLILDEGHTPRNENTEMVQSLAKIQTPRKVVLSGTLYQNHVREVFNVLNLVRPKFLNMGTSKPIVRRIQSRIHMPGLKRFDDLVENILQKDPDFKRKVAVIHDLREMTSKILHYYREDFLDELPGLVDFTVLLKLTPRQKHELKIVKMTHIKFKKSSVGSAVYMHPNLKPIAENNDEKSTYDHVKMDEFIKDLDVGEGVKSKFFRNMLNLCESAGEKLLVFSQYLLPLKYLERLAMKWKGWSLGKEIFVISGESSAEQREFSMEKFNNSPEAKVLFGSIRACSEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKKKVLKYFLF 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03521 803 CDD SF2_C_SNF 675 803 - -
Mepo1g03521 803 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 428 529 IPR014001 -
Mepo1g03521 803 Pfam SNF2-related domain 439 635 IPR000330 GO:0005524|GO:0140658
Mepo1g03521 803 Pfam Helicase conserved C-terminal domain 683 791 IPR001650 -
Mepo1g03521 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 475 802 IPR027417 -
Mepo1g03521 803 Gene3D - 393 556 IPR038718 -
Mepo1g03521 803 Gene3D - 599 803 IPR027417 -
Mepo1g03521 803 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 267 419 IPR044567 GO:0080188
Mepo1g03521 803 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 678 803 IPR001650 -
Mepo1g03521 803 SMART helicmild6 707 792 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03521 Mepo-Chr1 40816491 40820699 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mepo1g03521 SNF2_N 5e-10 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03521 1 40816491 40820699 Mepo1g03521 1 40816491 40820699 ECH