Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo1g03513 | ATGGGTGCTGCATGTTGTGTTGCAGCGAGAGATAAAACTATTCAAAGTGGACCAACCAGTGAAATCTGGCATAGGAATGCTCGGTGTTCCCCAACATGGAGCTTGCGATGGGATCATAGAAGCCGTGTAGCTGGAGAAGATACTTCTATAAATTGGTTTTCTGACGGTGTTAGCAGCAACGACAGATTGGAGAATAAAAATGAATCACATGTATCCGAGGATGGAAGCCCGTTGCAGAATTATCAAAGGAATAGATGGCAAAAATCCCCAATCTCTGAAGGAACTGCTCAACATACAAAATCATTTTCTGATCAATCTATTTCAAGGAATGTTTCCATAGATGGGAGAATGGACCAGGTGAATGAATTGGAAGAATCATCGGCAGTATCAATATCTTGTCCGTTTCCTACAAAAACTTCACCTACATTGTCTTCTACTTCGTTGTCAATATCTCCTCTGCCATCCCAAAGCCGCCTACCTCCATCCAGCTCAACGCCATCAAAGTGGCCCTCCCATTCCAGAGGATACCAATTATCACGGCAAGTTTCTGATAGCCGGATCATGGGATTTAAGTCACCTAGCAGTTTTTATGCATCCGAAGAAAGGCCAGTGTTTCCTTCACGGAGCAATGAATATGGTATGCACTCTGGCGGGGGATCTTCAGATTATTGTTCTAGGCCTGGCTTTACTGAGCTGATGGGCAATCCTCACATGGAAAGATGGTCAGTTGATAGCGAGTCATTTGGTTTTAATTGTGATAGGTTGGCTAGATTCAGTAGCCGGTTTTCAACTTCTCCAGTTGATTTGCAAACATGTGGTGTTTGCTCAAATCATTTAACTGAAAAGTCTTCTTGGAGCACTCAAAAGATTATTGCAAATAATGACCTTTCTGTAGTTTCTGTTCTTATTTGTGGACACGTCTATCATGCTGAATGTTTAGAGAGTATCACACCTGAAATCAATAAGTATGACCCAGCTTGCCCAGTTTGCACTTTTGGCGAGAAACAAACTCGTAAATTGTTTGAAAAAGCTATGAAAGCTGAAATGGATTCAAAAGCTAGAAATAAGAAATCAAGGAACCAAATTGTGGATAATGATATTGACGATGATGATGATGATTCTGTTGTATTTGATCAGTTTAGAGATAAAAGGCGTCAAAATAAAGGTCCTAGAATGGACTCTAGTTCTAGCAAAAGAAGCTCTTCTGGGAAACCTTTTCTGAGTAGACACTTCTCATTTGGCTCAAAGGGTTCCAAAAGCATGTTAGATAATCACCCAACCCGAAAGAAGGGTTTTTTTTGGGCGAAGTCTAGCAAGGAATAA | 1323 | 0.4097 | MGAACCVAARDKTIQSGPTSEIWHRNARCSPTWSLRWDHRSRVAGEDTSINWFSDGVSSNDRLENKNESHVSEDGSPLQNYQRNRWQKSPISEGTAQHTKSFSDQSISRNVSIDGRMDQVNELEESSAVSISCPFPTKTSPTLSSTSLSISPLPSQSRLPPSSSTPSKWPSHSRGYQLSRQVSDSRIMGFKSPSSFYASEERPVFPSRSNEYGMHSGGGSSDYCSRPGFTELMGNPHMERWSVDSESFGFNCDRLARFSSRFSTSPVDLQTCGVCSNHLTEKSSWSTQKIIANNDLSVVSVLICGHVYHAECLESITPEINKYDPACPVCTFGEKQTRKLFEKAMKAEMDSKARNKKSRNQIVDNDIDDDDDDSVVFDQFRDKRRQNKGPRMDSSSSKRSSSGKPFLSRHFSFGSKGSKSMLDNHPTRKKGFFWAKSSKE | 440 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo1g03513 | 440 | MobiDBLite | consensus disorder prediction | 422 | 440 | - | - | |
| Mepo1g03513 | 440 | SUPERFAMILY | RING/U-box | 271 | 331 | - | - | |
| Mepo1g03513 | 440 | MobiDBLite | consensus disorder prediction | 349 | 364 | - | - | |
| Mepo1g03513 | 440 | SMART | ring_2 | 272 | 330 | IPR001841 | - | |
| Mepo1g03513 | 440 | MobiDBLite | consensus disorder prediction | 72 | 109 | - | - | |
| Mepo1g03513 | 440 | MobiDBLite | consensus disorder prediction | 349 | 440 | - | - | |
| Mepo1g03513 | 440 | MobiDBLite | consensus disorder prediction | 55 | 109 | - | - | |
| Mepo1g03513 | 440 | MobiDBLite | consensus disorder prediction | 376 | 392 | - | - | |
| Mepo1g03513 | 440 | MobiDBLite | consensus disorder prediction | 125 | 184 | - | - | |
| Mepo1g03513 | 440 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 254 | 332 | IPR013083 | - | |
| Mepo1g03513 | 440 | ProSiteProfiles | Zinc finger RING-type profile. | 272 | 331 | IPR001841 | - | |
| Mepo1g03513 | 440 | PANTHER | EXPRESSED PROTEIN | 1 | 336 | - | - | |
| Mepo1g03513 | 440 | MobiDBLite | consensus disorder prediction | 393 | 421 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo1g03513 | Mepo-Chr1 | 40755342 | 40760793 | Dispersed/Transposed |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo1g03513 | 1 | 40755342 | 40760793 | Mepo1g03513 | 1 | 40755342 | 40760793 | ECH |