Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03465 ATGAACATGTTAGGCCTAAGAGACTTGGTTCTCATAGCACAAACTCCTTCATCACTTCACAACCAACAAAACCAAACCATTTCATTAGATCACAATCCAAACATTCCCTTACCTTCATCATCAGCCTTAAGTGTTGGTCTTGGAATTTTCCCACTCTTAACAACCACTCACCCTCATCATCAAAACCCTAACAATAACAATGACAATATTCATCAAGACTCAAATTTTTGGAACCTCAAGATGTGCCAACCACAACAAGTAATGATGATGAATTCAGCAAGAAAAAGAGTTGAAGAAGAAGAAGAAGAAGATGTAAGAAACAAAAACTTGATGATGGGGTGTGAGGAAAATGGTGAGTTTAGGGTTTGTCAAGATTGTGGAAATAGAGCTAAGAAAGATTGTAGCTATAAAAGATGTAGGACTTGTTGTAAAGGTCGTGGTTTTGATTGTAGTACTCACGTGAAGAGCACGTGGATACCGGCTTCGATGAGGCGGGACCGGAGTATGGTGGTGGCTGAAGGTGGTGATAGTGATGGTGGTGCTTCTTCTGGTACTAAGAGGCAGAGAATTTTGATTTCATCATCACAGAATAATGCTGCTGCTAACTCTCATAGTTCTAGTTCCAATGCTGCCACTAGAACAAGAAGTTTAAGCTTAGATATAACTAGCTCTTGTCACCAAGATCCTGGTTTCAAGCAGACTTTGCCTCGTTATGTTCGTGCGCCTGCGGTTTTCAAGTGCCATAGAGTATCTGCTATTGGCAATGGTGAAGATGAACTTGCTTACTTGGCCACTGTGAATATTAGTGGCCATGTATTCAAAGGGTTTCTCTATGATCAAGGTGTTGATGACAAAAATGAAACAATGCCTTGTGTTTCAGAATTGCAACTTGGAAGTAATGGAAGTGGAAAGAGTAATAGAGAATGTTCTTCTTCTGCTATTGAGGTTCAAACTAGTGCTTACCCTGCTTCTGCTTGTTGA 981 0.4027 MNMLGLRDLVLIAQTPSSLHNQQNQTISLDHNPNIPLPSSSALSVGLGIFPLLTTTHPHHQNPNNNNDNIHQDSNFWNLKMCQPQQVMMMNSARKRVEEEEEEDVRNKNLMMGCEENGEFRVCQDCGNRAKKDCSYKRCRTCCKGRGFDCSTHVKSTWIPASMRRDRSMVVAEGGDSDGGASSGTKRQRILISSSQNNAAANSHSSSSNAATRTRSLSLDITSSCHQDPGFKQTLPRYVRAPAVFKCHRVSAIGNGEDELAYLATVNISGHVFKGFLYDQGVDDKNETMPCVSELQLGSNGSGKSNRECSSSAIEVQTSAYPASAC 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03465 326 NCBIfam LRP1 C-terminal domain 235 282 IPR006511 -
Mepo1g03465 326 Pfam Domain of unknown function (DUF702) 122 283 - -
Mepo1g03465 326 NCBIfam putative zinc finger domain, LRP1 type 122 164 IPR006510 -
Mepo1g03465 326 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 46 313 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03465 Mepo-Chr1 40187247 40190989 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mepo1g03465 DUF702 3.7e-54 No_clan