Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03374 ATGAAGAAGAAGCTCGATACCCGTTTCCCTGCTGCTCGGATAAAGAAAATAATGCAAGCTGATGAAGATGTTGGAAAGATAGCATTGGCTGTGCCTGTTTTAGTTTCTAAAGCTCTGGAGCTATTTCTGCAAGACCTTTGTGACCGTACTTATGAAATAACTCTTCAAAGAGGGGCAAAAACCATGAATTCATTGCATTTAAAACATTGTGTACAAAGCTATAATGTATTTGACTTTCTGAAGGATGTAGTCAGCAAGGTTCCTGACTACGGCCATGGTCATGGCCATACTGATGCTGGTGGTGCTGATGATCAGACCATTCCAAAAAGAAGGAAAGCTGCAGGTGATGATGGTAATGACAGTGATGAAGAAGCTAAGAGGGGCAAGATGCTTGAGTTGGGCCACACTAGCCCTACTGGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGACGAGGTCGAGGTCGAGGACGAGCTATTCAAAGAGAGGGACATCATCAGGAGACTGAGTCTGAGCCTTGTCCTTCTGTTCAGCAAGTTGGTCAAAATACTACAGATACAAATGTGGCTATACTTGATGGCTCAGAGTCAAATGAGTTACCAAAGAATAATGTTGTTGTTCTTCCTGCTGATGACTCTGACTCACTCCTTAATATTGATCTGAATGCCAATATGAACGAAAATGATGATAAAAAGGCTAGCACTGTAGCTAATCTCACTGCCGCTAACCCCGAAGCCGCTAATCCTGAAGCCGCTAATCCCCCTGTCTCTGAACCTCCTCCAACAGACAGCAGTCATCATGAAGAAATTCCGGGCTGGTCCCTTTCTGAGGTGGACAAGATGGCCATTGATTCGATGCAGCTTGCCCAGCTTGGTACGCGAATGGATGAGGATGATGAAGATTATGACGAGGAAGGGTAA 918 0.4521 MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLKDVVSKVPDYGHGHGHTDAGGADDQTIPKRRKAAGDDGNDSDEEAKRGKMLELGHTSPTGRGRGRGRGRGRGRGRGRAIQREGHHQETESEPCPSVQQVGQNTTDTNVAILDGSESNELPKNNVVVLPADDSDSLLNIDLNANMNENDDKKASTVANLTAANPEAANPEAANPPVSEPPPTDSSHHEEIPGWSLSEVDKMAIDSMQLAQLGTRMDEDDEDYDEEG 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03374 305 MobiDBLite consensus disorder prediction 91 181 - -
Mepo1g03374 305 SUPERFAMILY Histone-fold 3 90 IPR009072 GO:0046982
Mepo1g03374 305 MobiDBLite consensus disorder prediction 155 169 - -
Mepo1g03374 305 MobiDBLite consensus disorder prediction 91 131 - -
Mepo1g03374 305 FunFam dr1-associated corepressor homolog 1 86 - -
Mepo1g03374 305 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Mepo1g03374 305 MobiDBLite consensus disorder prediction 243 305 - -
Mepo1g03374 305 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 119 - -
Mepo1g03374 305 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03374 Mepo-Chr1 38916174 38920196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03374 1 294 CCAAT-HAP5 Transcription Factor Family AT3G12480 49.669 1.17e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mepo1g03374 CBFD_NFYB_HMF 2.4e-19 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03374 1 38916174 38920196 Mepo1g03374 1 38916174 38920196 ECH