Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03369 ATGTCTCCATCAATGAAATCAAAATCCAAGTCGAAGGCGAAGGCTGCAAAGGAACAACAAAAAAATTCTCCAAAGACTTCCGGATCTACTAATGATGAGAGCAGCATTCCTTCTAGTGCGTGTGATATGGAAACATCTTTGGTTGATTCTTCTTCCATAGTTAATGACAACAGCCAATTCGCAAAAATAAATGAAACAGATGATCATTCTATTAGTCCTCAAGGAACGGTGTCTGAGTATGATTCTGTTTCTAATAACGGCAGTTGTTCTGGTGAATCGGAAGACACTAAAGAGAAAGCTGCAAACTCGTCTACTCGGTTGGAATTTATACCTGGTTGTGATAACGACCGAAGGGATAAGATCCGACTGAAGAATGAGAGGAAGCACCAGAGACAGAGGGAAAGGAGAGCTCATGAGTTGCACGAGCGATGTGTTGCGTATCTGATGTCGAGAAAGCTAGAAAAACTTGTCCAGAAGTTAGTGGCCATGGGATTCACTACCGAGCGAGCAACGTTGGCTTTGAAGTTAAACAACGGAAAATTAGAAGAATCGATATCGTGGCTATTTGAAGGAGGAAGTGAAGTGAAAGATACTACGAACCTTGTAAGTGATGGTAATTTGAAGATCGACATAAGTGAAGTGCTTGAACAAATTTATGCTCTGGAAGTAAAGTACAATTGTTCAAAGCAAGAAGTCGAAAGAGCAGTTGTTGCCTGTGAAGGTGATCTTCAAAAGGCAGAAAACACGTTAAAATCTCAGAAGGAAGAATCTCATGTGAATCAGTCAGAAGATTCTGCTCAAAATAATAGTTCGATGAGATCTCATGGATCACAACCAGCGTCAGTATCAATACAGCAGAGAGGGAATGAAAGTGATTTCAACTATTACAATATACGTGGTGCTGATTCTATGTTCCATGATCCTGAAAATAGGAATCCACAGTCTCTACACTTGAATCATCAAAATGAACTGACACAGAAAAGATGGGGTGTTAGTGCTACACCATCAAATCCTTCTAATATGTTACAATCCATGCAAGCAATGTCACCGTATGTTAAAATGGAGGCGCAGCCGAGTGCCTTTAGGAACGATGGAAGAATGATTCATCAAGGAGTAGGAAGGGAACCGGTAGTCATGATGCAGCATCCACAATTCGCCGATGCCAAACAAAATTATCTGAATTCTATGAATTCCATACCTTCCGGAACATCTAGTTGGTATGTAAATAATGTTCCGTCTTACGAAAATACAAGGTCAAATGGGAATTTACTACTACAAAATCATGGCATGGGAAATGTCGGCACAGATCGCCTGCAGCAACTTTCTCAAGCTCCTTATAAAGAATATTCCCATGTATTTGGGCCGGCAGATTCTTCAATCTCATCAGGTGGAATGGGAGGTTTCTATAAGCCGATGGTTGCATCGTCACCTTCACCTACAATGCCTTCCCAGTCTCACCCTCAAGTACATCACGGCTCACGGAACACCGCCGCATCTTCGCCTGCACTTACAGTTCCACCTTCCCTTGGGCTCTTTTGCGGTCATCAGAACCCATCGGCCAGATCATTCAGCTCACATTCACATGTGGATTGGAATACCGGGGGCATGGTGCAAGAATTCGACTACAACAATATAGATTGGAGTTTAGATTGCCCGCCATCATCCAGATCAGGTGATGTATGGCTAGGATTCTCATCGTCGTTGAGAAACAACGCTGGGAATAGGATGGCCAGTTCTTATATGACTGGATCGCGAAATGTTGGCACGGCGAGGGAAATTTCATCGTCTGCTGGATTGCGAGATTGGACATCACCTTTTGCTGGGAAGGACATATTCAGTGCTCCCAGAAAGTTTGTTACTTTTCCTCCTATGTAG 1875 0.4277 MSPSMKSKSKSKAKAAKEQQKNSPKTSGSTNDESSIPSSACDMETSLVDSSSIVNDNSQFAKINETDDHSISPQGTVSEYDSVSNNGSCSGESEDTKEKAANSSTRLEFIPGCDNDRRDKIRLKNERKHQRQRERRAHELHERCVAYLMSRKLEKLVQKLVAMGFTTERATLALKLNNGKLEESISWLFEGGSEVKDTTNLVSDGNLKIDISEVLEQIYALEVKYNCSKQEVERAVVACEGDLQKAENTLKSQKEESHVNQSEDSAQNNSSMRSHGSQPASVSIQQRGNESDFNYYNIRGADSMFHDPENRNPQSLHLNHQNELTQKRWGVSATPSNPSNMLQSMQAMSPYVKMEAQPSAFRNDGRMIHQGVGREPVVMMQHPQFADAKQNYLNSMNSIPSGTSSWYVNNVPSYENTRSNGNLLLQNHGMGNVGTDRLQQLSQAPYKEYSHVFGPADSSISSGGMGGFYKPMVASSPSPTMPSQSHPQVHHGSRNTAASSPALTVPPSLGLFCGHQNPSARSFSSHSHVDWNTGGMVQEFDYNNIDWSLDCPPSSRSGDVWLGFSSSLRNNAGNRMASSYMTGSRNVGTAREISSSAGLRDWTSPFAGKDIFSAPRKFVTFPPM 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03369 624 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 151 191 IPR015940 -
Mepo1g03369 624 MobiDBLite consensus disorder prediction 476 500 - -
Mepo1g03369 624 MobiDBLite consensus disorder prediction 20 91 - -
Mepo1g03369 624 MobiDBLite consensus disorder prediction 1 111 - -
Mepo1g03369 624 SUPERFAMILY UBA-like 154 196 IPR009060 GO:0005515
Mepo1g03369 624 SMART uba_6 153 190 IPR015940 -
Mepo1g03369 624 MobiDBLite consensus disorder prediction 262 287 - -
Mepo1g03369 624 Coils Coil 229 263 - -
Mepo1g03369 624 MobiDBLite consensus disorder prediction 248 287 - -
Mepo1g03369 624 Gene3D - 116 203 - -
Mepo1g03369 624 MobiDBLite consensus disorder prediction 474 500 - -
Mepo1g03369 624 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 1 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03369 Mepo-Chr1 38792838 38795858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03369 1 256 EF-hand Containing Proteins AT5G12120 50.376 1.41e-69 235