Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03347 ATGTCTCATGAATCACAAAGGGTTGTGGTGATCCACCATGCATCTACAAACTTCAGTGCAAGAGCTCTTAAATGGGCCCTCAATGGTTTTTCACTTGAGAATGGAGATAACCTTACACTTGTTGCAATTCTTCGCCATGTAACTAGTCCTACTAGTGCTAGATTTCGGGCAATATTTGGGACTGACCAAAATATTGTTGAGGAAGAGGTTGCCAAGAAGAAAGAAAAGCTGTATAATAATACATGCATCAGGAAAATTTCTGAGCACTGTGAAAGACACAAGATTCAGTTCTTGATAGAAGTGATTCCGGGCAAAATACCAGAACATGCTATAAATGCCGCCATCCGTTTGAATGCAACATCGGTTATACTTGATAGGGACATGAAGAAATATAAGAAGGATTTCATGCAGAGTCTCTCTTGTGCTTTGCTAGTAATGAAAAGTGATAACTCCATTAAGCACTTGAGAGGGCCAAGAAAAGAAAAGATTTCTTTTAGAAGATATGATGATGCAAGTTCTGTAAAAAGTTCTGAATCCTCACCGAGTTTGTGGAGCATGACAAACGCTGTTTTCCGCTCTAAATCGAGCTCAAATCTAACAAAGATTGTTTGTCATCAACTTCATTGTCAAATGATACAAACACCTGAAGATAAAGATCTAGATATGGCAAGAGGCTATTGCCTATTACCAACTTCTGATAATCAAAAGACAAGTGTTCTTGAAATGCATCACAAAGATTCAACATTTGAACATATCAGAAACCATAAAACATATCAGATCGTTGAAAATTTTAAAAATTCTGTGTGCTCAGTGTGTGAGAACAGAAGGCCAAAATTTGAATTGATGAAAGAATTCACATATGGGGAGCTGCATGAAGCAACGCATGGTTTTTCGCCAAAGAACTATTTGTCAGAAGGTGGATTTGGATCTGTTTATTGGGGAAAGATGCAAGGACTCAAGATTGCTGTTAAGAAACATAAATTTGCAAGTCTCCAAGGAGAAAAAGAATTCAAATCTGAAGTTAATGCACTCAACAAAGCAATACATGAAAATGTGGTCATGCTGCTAGGATCTTGTTCGGAGGGAAAGAACAGATTTCTTGTATATGAATTTGTTTGCAATGGCTCCCTTGATCAACATTTATCACAACACTCTAGGAAACCTCTTAATTGGTCAGCCAGGATCAAAGTGGCAATGGGAGCTGCAAAAGGCTTGTTGTATTTGCATGAGAATAACATAATACACAGAGATATGAGACCAAGTAACATCCTTGTTACACATGATTTTGAAGCAATGATTGGAGATTTTGGTCTAGCTAGGACTGAACAAATGGACTCAGTGTACTCAACAGATGTGGTTGGAACATTAGGGTATATGGCACCAGAATATGCAGAATCTGGTAAAGTCTCAACTAAGTCAGATGTGTATTCTTTTGGAGTGGTGCTTCTTCAGTTAATAACAGGAATGAGGACCACGGACAAAAGAATTGGACACAAAAGCCTTGTGGGATGGGCGAGGCCACTACTGAAGGAAAGGAACTATCCAGATCTAATTGATGAAAGGATGATGGATACCTATGATTGTCATCAGCTTTTTTGGATGATTCGTTTAGCAGAAAAATGTCTCACTAGAGATCCTCAAAAGCGATTACCAATGGATACTGTGGTTAGTGCATTAACTCATATAGTAGAAGGCAGCACATGCAGCATGGTACTAAGAGACTGCTCCCCAGCACGGTCAGATTCCTCTTATGACATGTCAGAATCCCCTGTATCAGATGTCTCTCCAGAAATAGAAGATGAAGATGGAATCTTCTGTGTAGGATGTACTACAGTTAATCTACGACCCCCACCATCTCCTCCATTAGGAAGCACTTCATGGAGTACTTCAAAGCACATATGTCCACAAGGCTGA 1914 0.3913 MSHESQRVVVIHHASTNFSARALKWALNGFSLENGDNLTLVAILRHVTSPTSARFRAIFGTDQNIVEEEVAKKKEKLYNNTCIRKISEHCERHKIQFLIEVIPGKIPEHAINAAIRLNATSVILDRDMKKYKKDFMQSLSCALLVMKSDNSIKHLRGPRKEKISFRRYDDASSVKSSESSPSLWSMTNAVFRSKSSSNLTKIVCHQLHCQMIQTPEDKDLDMARGYCLLPTSDNQKTSVLEMHHKDSTFEHIRNHKTYQIVENFKNSVCSVCENRRPKFELMKEFTYGELHEATHGFSPKNYLSEGGFGSVYWGKMQGLKIAVKKHKFASLQGEKEFKSEVNALNKAIHENVVMLLGSCSEGKNRFLVYEFVCNGSLDQHLSQHSRKPLNWSARIKVAMGAAKGLLYLHENNIIHRDMRPSNILVTHDFEAMIGDFGLARTEQMDSVYSTDVVGTLGYMAPEYAESGKVSTKSDVYSFGVVLLQLITGMRTTDKRIGHKSLVGWARPLLKERNYPDLIDERMMDTYDCHQLFWMIRLAEKCLTRDPQKRLPMDTVVSALTHIVEGSTCSMVLRDCSPARSDSSYDMSESPVSDVSPEIEDEDGIFCVGCTTVNLRPPPSPPLGSTSWSTSKHICPQG 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03347 637 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 372 574 - -
Mepo1g03347 637 ProSitePatterns Tyrosine protein kinases specific active-site signature. 413 425 IPR008266 GO:0004672|GO:0006468
Mepo1g03347 637 FunFam Proline-rich receptor-like protein kinase PERK8 259 371 - -
Mepo1g03347 637 Gene3D Phosphorylase Kinase; domain 1 268 371 - -
Mepo1g03347 637 PANTHER OS01G0253100 PROTEIN 188 564 - -
Mepo1g03347 637 Pfam Protein tyrosine and serine/threonine kinase 301 559 IPR001245 GO:0004672|GO:0006468
Mepo1g03347 637 Gene3D Transferase(Phosphotransferase) domain 1 372 574 - -
Mepo1g03347 637 ProSiteProfiles Protein kinase domain profile. 297 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03347 637 MobiDBLite consensus disorder prediction 617 637 - -
Mepo1g03347 637 SUPERFAMILY Protein kinase-like (PK-like) 282 576 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03347 Mepo-Chr1 38547648 38552320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03347 218 573 Trihelix Transcription Factor Family AT5G38560 39.892 5.36e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mepo1g03347 PK_Tyr_Ser-Thr 4.8e-48 CL0016