Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03285 ATGAATGTTTCCAGCAAACAAGCTATTCCACAAGAAGATGCTAATACTATTCCAAACATGTACAATACCGGTACTTTGAAACCGGTGACCAAAGCAGTTCATAAAACTAATGAACACAAGACTGCCAAAAGAGATGCTGACAATCAAGAGAAAGCTTTCAAGAAGCCAGATAAGGTTCTGCCGTGTCCTCGCTGCAATAGTTTGGACACAAAGTTTTGCTATTTCAACAATTACAATGTTAACCAACCAAGGCATTTCTGCAAAAATTGCCAGAGGTATTGGACAGCTGGTGGAGTAATTAGGAATGTTCCTATTGGAGCCGGTAAGCGCAGAAATAAGCAATTGTCTTTGCAGAATTGTCAAGTTTCTGTTACCCTTGATGCAGTACCTGTCATACACATAGATTCCAAGGAGGAAGTTCCTCTTAGTGAATCGGTAGAAACTGTGTTAAATCTCAAGGGCCATAGAAAAATTGAAACGGACTCTTCTACTGTCAAAGAGGATATTGAGAACTCTTCCAGCTCTTCTGTGAGAGCTGCTGAATCCGGGGAAATGGAGTACTCAGAAAGTGGAATAGAGCATGCTGGTTTGACTTTGACACCACAATGCAATGGCTTAATTCCTTTACATTCGCTTCATTATTACTCTGCTCCTCCATGGACTTATCCATGTTGGAATCCGGTGGCATTTAAGCCGGATAACATAACGTCAAGTCCTGCAACCATGATGGCTGTAGAAGTACCGATGACACCTTCGTATTGGGGCTGTATGCCAAATTGGGTTGGCCAAATGGAAGAATTATCGTTAGTTGGATCTGCGTTTAACGGCATTCCATCCCCTTCATCTTCGGCTGGCAGTGGTACTTGTTCCGGTAATAGGTCACCAACTTTAGGAAAACATTGTAGAGATGGAAGTACACAAGAAGAAGATATAATGAAGCAGAATATTTGGGTGCCGAAAACTATCAGAATTAATGATCCAGAAGAGGCTGCTAAGAGTTCTATATGGTCAACTTTGAGAACAAAATCTGAACAGAACAAACCTATTATGAAAGGAAGTGTTTTTAAATCATTTGAACCGAAGTCAAATGCAAGTTCTCGTGATTTAGACGATAATCAAATTCTGAGAGCAAACCCTGCTGCTTTCTCTCGCTCCGGATCCTTTCAGGAAAGCGTGTAA 1179 0.4114 MNVSSKQAIPQEDANTIPNMYNTGTLKPVTKAVHKTNEHKTAKRDADNQEKAFKKPDKVLPCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGVIRNVPIGAGKRRNKQLSLQNCQVSVTLDAVPVIHIDSKEEVPLSESVETVLNLKGHRKIETDSSTVKEDIENSSSSSVRAAESGEMEYSESGIEHAGLTLTPQCNGLIPLHSLHYYSAPPWTYPCWNPVAFKPDNITSSPATMMAVEVPMTPSYWGCMPNWVGQMEELSLVGSAFNGIPSPSSSAGSGTCSGNRSPTLGKHCRDGSTQEEDIMKQNIWVPKTIRINDPEEAAKSSIWSTLRTKSEQNKPIMKGSVFKSFEPKSNASSRDLDDNQILRANPAAFSRSGSFQESV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03285 392 MobiDBLite consensus disorder prediction 280 301 - -
Mepo1g03285 392 MobiDBLite consensus disorder prediction 280 306 - -
Mepo1g03285 392 MobiDBLite consensus disorder prediction 357 392 - -
Mepo1g03285 392 ProSiteProfiles Zinc finger Dof-type profile. 60 114 IPR003851 GO:0003677|GO:0006355
Mepo1g03285 392 MobiDBLite consensus disorder prediction 358 392 - -
Mepo1g03285 392 Pfam Dof domain, zinc finger 57 114 IPR003851 GO:0003677|GO:0006355
Mepo1g03285 392 MobiDBLite consensus disorder prediction 161 181 - -
Mepo1g03285 392 MobiDBLite consensus disorder prediction 1 23 - -
Mepo1g03285 392 MobiDBLite consensus disorder prediction 167 181 - -
Mepo1g03285 392 ProSitePatterns Zinc finger Dof-type signature. 62 98 IPR003851 GO:0003677|GO:0006355
Mepo1g03285 392 PANTHER CYCLIC DOF FACTOR 2 27 391 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03285 Mepo-Chr1 37941903 37943647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03285 11 391 C2C2-Dof Transcription Factor Family AT5G39660 37.470 4.08e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo1g03285 zf-Dof 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g03285 - - cam:101489693 543.117