Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03283 ATGGCATCATCATCAATGGCTTCCTTTCAATTGCTTTCTTCTCATTCTCCTCAGCTTTGCATCTCTCCCTTCTCTCGTCTGCCTAAATTCAACACAACATTATTTACTTCCTGCACCCCCAACAACAATAACAACCGCTTCTCTCTTTCTCTCACTAAACCAACTTCTTCATCCTTTCTCATCATAACAGCTTCTTCTTCTAACAACAATACCATGCTTCCTCCTTACAACGTTTTGATTACTGGCTCAACCAAAGGGATAGGGTATGCTTTGGCGAAAGAGTTTCTAAAAGCAGGAGATAACGTTTTAGTTTGCTCAAGATCAGATGAAAGGGTAGAGACTGCAGTCAAGAGCTTGAGAGGAGAATTTGGGGAGCAGCATGTGTGGGGCACTACATGTGATGTGAAAAATGGAGAGGATGTGAAGAAACTAGTTTCGTTTGCTAAAGAAAAACTGAAATACATTGATATATGGATCAATAATGCTGGATCAAATGCGTATAGCTACAAGCCACTTGCTGAAGCATCAGATGAAGATCTTATTGAGGTGGTTACAACAAACACACTTGGCTTGATGATATGCTGCCGAGAGGCAATAAAGTTGATGGTGAGCCAACCTCGTGGAGGTCATATTTTTAATATTGACGGGGCAGGTTCAGATGGAAGACCAACTCCCAGGTTTGCTGCATATGGAGCAACAAAGAGAAGTGTGGTTCATTTGACAAAGTCATTACAGGCAGAATTGCAGATGCAAGATGTTAAAAATGTCATGGTTCACAATCTTTCGCCAGGAATGGTTACAACAGATCTTCTCATGTCTGGCGCCAATACAAAACAGGCAAAGTTTTTCATTAATGTATTGGCTGAACCAGCCGAAGTGGTTGCAGAATACTTAGTTCCAAACATTAGATCTATCCCTGCCAACAGATCAATGAAGCCGACATACATCCGGTTCCTCACGGGTTTGAAAGCTTATTCCCAAATATTTTCAAGATTTGCATTTGGGGCAAGGAGGAACCGGTACATTATTGAAGATTGA 1038 0.4133 MASSSMASFQLLSSHSPQLCISPFSRLPKFNTTLFTSCTPNNNNNRFSLSLTKPTSSSFLIITASSSNNNTMLPPYNVLITGSTKGIGYALAKEFLKAGDNVLVCSRSDERVETAVKSLRGEFGEQHVWGTTCDVKNGEDVKKLVSFAKEKLKYIDIWINNAGSNAYSYKPLAEASDEDLIEVVTTNTLGLMICCREAIKLMVSQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVMVHNLSPGMVTTDLLMSGANTKQAKFFINVLAEPAEVVAEYLVPNIRSIPANRSMKPTYIRFLTGLKAYSQIFSRFAFGARRNRYIIED 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03283 345 Gene3D - 65 319 - -
Mepo1g03283 345 CDD SDR_c 78 299 - -
Mepo1g03283 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 77 296 IPR036291 -
Mepo1g03283 345 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 164 IPR002347 -
Mepo1g03283 345 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 209 217 IPR002347 -
Mepo1g03283 345 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 230 249 IPR002347 -
Mepo1g03283 345 PRINTS Glucose/ribitol dehydrogenase family signature 230 249 IPR002347 -
Mepo1g03283 345 PRINTS Glucose/ribitol dehydrogenase family signature 77 94 IPR002347 -
Mepo1g03283 345 PRINTS Glucose/ribitol dehydrogenase family signature 203 219 IPR002347 -
Mepo1g03283 345 PRINTS Glucose/ribitol dehydrogenase family signature 254 271 IPR002347 -
Mepo1g03283 345 PRINTS Glucose/ribitol dehydrogenase family signature 153 164 IPR002347 -
Mepo1g03283 345 Pfam short chain dehydrogenase 78 273 IPR002347 -
Mepo1g03283 345 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 217 245 IPR020904 GO:0016491
Mepo1g03283 345 FunFam Chlorophyll(Ide) b reductase NOL, chloroplastic 73 318 - -
Mepo1g03283 345 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 64 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03283 Mepo-Chr1 37923307 37930973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03283 78 270 Acyl Lipid Metabolism Gene Families AT1G24360 32.161 2.37e-16 77.0