Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03281 ATGCATAATCCAAAATCCGCAGCGTCTTTCCTCATAGCCCGCGCTAAAAACTCTCTTCAACTTCGCCACCGTAACAATTATCGCTTTCTCACTTCAACTTCACCGTTACTCTTATTCTCCACGCGTTTATCTCAACCGTTTATCTCCACGCGCTTCTTCTCTGGATATTATAACGCTGAACAGTTCTCTGATGATGAATATGAATGTGATTTCGAGAATCACCAGGCATCGTCTACCGTGGCCAACGTGGATGAGTGGAAATGGAAACTCAGTATGCTGTTACGGAACGAAAAGGATCAGGAAATTGTATCTAGAGACAAAAGAGATAGGAGAGACTATGAACAAATAGCCAACCTTGCCAAAAGAATGGGACTTTACAGTGAGCTGTTTGGGAAAGTAGTTGTTGCAAGTAAGGTGCCTCTTCCTAACTACCGACCAGATTTGGATGACAAACGTCCACAAAGAGAGGTTGTGATTCCACTAAGTTTGCAAAGGAGGGTGGAGGGTTTGGTGCAGGAGTACCTTGATAGACTACAATTAAATTCTGCAAAGACAACTGACTCTCTGGATAATGTGAATTCCACCAATCAGATTAGAGATATAGACATGGATGAAAATGCCAATTCTTTTGTCGATGAATCTGTTATGGAAAAGGTTCTCCAAAAGAGGAGTTTGAGGATGCGTAATATGCAAAGATCTTGGCAGGAATCACCTGAAGGCAAGAAGATGCTGGAATTCCGGAAGTCTTTACCAGCATTTAGGGAGAAGGAAGGTTTACTTCAAGCTATAGCACGTAATCAGGTAATAGTTATCTCTGGAGAGACCGGCTGTGGTAAAACTACTCAACTTCCTCAATATATATTAGAGTCCGAGATAGAGTCCGGCCGTGGGGCATTTTGCAGCATTATTTGCACACAACCTCGAAGGATATCTGCTATGGCAGTGTCTGAGAGAGTTTCAGCAGAGAGAGGAGAGTCTCTGGGAGAAACAGTTGGCTTCAAAGTTCGGTTAGAAGGAATGAGAGGGAAAAACACCCATCTGTTATTTTGTACCAGTGGTATATTACTCCGAAGGTTGCTGAGTGATCGGAACCTGAGTGGTATAACCCATGTGTTTGTGGATGAAATTCACGAGCGAGGAATGAATGAAGACTTCTTACTGATTGTGTTGAAGGATCTTCTTCCACGTCGTCGTGATTTAAGATTGGTATTGATGAGTGCCACTTTGAATGCTGAACTTTTCTCAAATTATTTTGGAGGTGCGCCGACATTTCATATCCCGGGTTTCACCTATCCTGTAAGAGCTCACTTTTTAGAAGATGTTTTGGAAATGACTGGATATAAGTTGACATCTTTCAACCAAGTTGATGATTATGGTCAAGATAAACTGTGGAAAACACAAAAGCAGCTTGCACCACGAAAGAGGAAAAACCAGATCACTGCTCTTGTTGAGGATTCCCTTTCTAAATCAAGCTTTGAGAACTATAGTCCCAAGACACGCGACTCATTATCTTCTTGGGCACCTGACTGCATAGGATTTAATCTCATTGAGGCTGTTCTATGCCATATATGTCGGAAGGAACGACCAGGGGCCGTCCTAGTATTTATGACTGGGTGGGAAGATATAAGCTGTTTAAGAGATCAGCTTAAAGCGCATCCTCTTTTAGGAGATCCCAATAGGGTTCTGCTTCAAACATGCCATGGTTCAATGGCAACTTCTGAACAGAAACTCATATTTGAGAAACCTCCTCCAAATGTAAGGAAAATTGTACTTGCGACAAATATGGCAGAGGCAAGTATTACGATCAATGACGTTGTTTTTGTCATAGACTGTGGAAAAGCAAAAGAGACCACTTATGATGCTTTGAATAACACACCATGTCTGCTACCTTCTTGGATTTCACAAGCATCTGCACGGCAGAGAAGAGGTAGGGCTGGTCGTGTGCAGCCAGGAGAATGCTACCACCTTTACCCAAAATGTGTTTATGAAGCCTTTTCTGAATATCAACTTCCTGAACTTTTGAGAACGCCTTTGAATTCTCTTTGCTTGCAAATAAAAAGTTTGCAGGTTGAGAGCATTGGAGAATTCTTATCATCAGCTTTGCAGGCACCAAAGCCACGTACCGTCCAAAATGCTATTGATTTTCTCACGATGATTGGAGCATTAGATGAAAAAGAAAATCTTACCAATCTTGGGAAGTTTCTCTCGATACTTCCTGTAGATCCCAAGCTGGGAAAAATGCTGATAATGGGAGCTATATTTAGATGCTTTGATCCTGTTCTTACAATAGTTGCTGGCCTTAGTGTCAGGGATCCTTTCCTTTTGCCCCAAGACAAGAAAGATTTAGCAGGGACTGCAAAGTCTAGGTTTTCTGCTAAAGATTACAGTGATCATATGGCTCTTGTTCGAGCATATGAAGGATGGAAAGATGCTGAAAGAGAAGGATCGGCTTATGAATACTGCTGGAGAAATTTTCTCTCCGCCCAAACTCTTCAGGCAATTCATTCACTTCGGAAACAGTTCAGCTTCATCTTGAAAGAAGCTGGCTTGGTAGATACAGATGCAAGCATTAATAATAAATTGAGTCATAATCAATCTCTTGTACGTGCTGTCATATGTTCTGGACTCTTTCCTGGCATAGCATCCGTTGTGCACAGGGAGACATCCATGTCATTTAAGACAATGGACGATGGCCAGGTTTTATTATATGCAAATTCAGTGAATGCAAGGTACCAGACTATTCCTTACCCATGGTTAGTTTTTGGGGAGAAAGTAAAGGTCAATGCTGTTTTCATCCGTGATTCCACTGGTGTATCTGATTCAATCCTTATCCTATTTGGCGGTGCTTTAAGTAATGGGATACAGGCTGGGCATCTGAAAATGTTAGATGGGTACGTTGACTTCTTTTTGGATCCAAATTTAGCTGACTGCTATTTGAAGCTTAAGGAAGAACTTGATAAGCTTATCCAAAAGAAGCTAGAAGATCCTGGCATTGACATTCACAAGGAAGGGAAATACTTGATGCTTGCTGTTCAGGAATTGGTTTCAGGGGATCAGTGTGAAGGAAGATTTGTGTTTGGTCGTGACAGCCGAAAGCCTAAGGCCTCTAATGACGAGAATAAATTCACTAAAGATGGCACAAACCCCAAGAGCTTGCTGCAAACACTTTTGATGCGAGCAGGGCACTCCGCACCAAAATATAAAACAAAACATCTCAAGACAAATGAGTTCAGGGCATTGGTAGAGTTTAAAGGAATGCAATTTGTTGGCAAACCGAAAAGGAATAAGCAACTTGCAGAAAGGGATGCAGCTATAGAGGCATTGGCTTGGTTAACTCACACCTCTGACAATGCTCAGCATGAAGACGACAAATCTCCTCCTGATGTCACCGACAACATGTTAAAACTCCTAGGGAAGCGTAGAAAATCATCGAAACGACGTTCTGATTGA 3450 0.4194 MHNPKSAASFLIARAKNSLQLRHRNNYRFLTSTSPLLLFSTRLSQPFISTRFFSGYYNAEQFSDDEYECDFENHQASSTVANVDEWKWKLSMLLRNEKDQEIVSRDKRDRRDYEQIANLAKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLVQEYLDRLQLNSAKTTDSLDNVNSTNQIRDIDMDENANSFVDESVMEKVLQKRSLRMRNMQRSWQESPEGKKMLEFRKSLPAFREKEGLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCSIICTQPRRISAMAVSERVSAERGESLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLSGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFSNYFGGAPTFHIPGFTYPVRAHFLEDVLEMTGYKLTSFNQVDDYGQDKLWKTQKQLAPRKRKNQITALVEDSLSKSSFENYSPKTRDSLSSWAPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWEDISCLRDQLKAHPLLGDPNRVLLQTCHGSMATSEQKLIFEKPPPNVRKIVLATNMAEASITINDVVFVIDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGEFLSSALQAPKPRTVQNAIDFLTMIGALDEKENLTNLGKFLSILPVDPKLGKMLIMGAIFRCFDPVLTIVAGLSVRDPFLLPQDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRKQFSFILKEAGLVDTDASINNKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVLLYANSVNARYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGALSNGIQAGHLKMLDGYVDFFLDPNLADCYLKLKEELDKLIQKKLEDPGIDIHKEGKYLMLAVQELVSGDQCEGRFVFGRDSRKPKASNDENKFTKDGTNPKSLLQTLLMRAGHSAPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNAQHEDDKSPPDVTDNMLKLLGKRRKSSKRRSD 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03281 1149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 258 818 IPR027417 -
Mepo1g03281 1149 SMART ultradead3 248 441 IPR014001 -
Mepo1g03281 1149 Gene3D - 199 428 IPR027417 -
Mepo1g03281 1149 MobiDBLite consensus disorder prediction 1028 1048 - -
Mepo1g03281 1149 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 260 427 IPR014001 -
Mepo1g03281 1149 CDD DEXHc_RHA-like 266 426 - -
Mepo1g03281 1149 Gene3D - 691 792 - -
Mepo1g03281 1149 SMART ha2_5 711 802 IPR007502 GO:0004386
Mepo1g03281 1149 SMART helicmild6 543 649 IPR001650 -
Mepo1g03281 1149 Pfam DEAD/DEAH box helicase 261 411 IPR011545 GO:0003676|GO:0005524
Mepo1g03281 1149 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 515 689 IPR001650 -
Mepo1g03281 1149 FunFam DEA(D/H)-box RNA helicase family protein 1030 1116 - -
Mepo1g03281 1149 FunFam DExH-box ATP-dependent RNA helicase DExH3 203 428 - -
Mepo1g03281 1149 MobiDBLite consensus disorder prediction 1116 1138 - -
Mepo1g03281 1149 CDD SF2_C_RHA 504 657 - -
Mepo1g03281 1149 PANTHER ATP-DEPENDENT RNA HELICASE 205 951 - -
Mepo1g03281 1149 Gene3D - 1029 1116 - -
Mepo1g03281 1149 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 868 949 IPR011709 -
Mepo1g03281 1149 Pfam Double-stranded RNA binding motif 1049 1111 IPR014720 -
Mepo1g03281 1149 SMART DRBM_3 1049 1112 IPR014720 -
Mepo1g03281 1149 FunFam Putative ATP-dependent RNA helicase DHX36 691 796 - -
Mepo1g03281 1149 SUPERFAMILY dsRNA-binding domain-like 1042 1125 - -
Mepo1g03281 1149 Pfam Helicase conserved C-terminal domain 518 648 IPR001650 -
Mepo1g03281 1149 Pfam Helicase associated domain (HA2) 712 785 IPR007502 GO:0004386
Mepo1g03281 1149 Gene3D - 510 668 IPR027417 -
Mepo1g03281 1149 MobiDBLite consensus disorder prediction 1028 1045 - -
Mepo1g03281 1149 FunFam DExH-box ATP-dependent RNA helicase DExH3 511 667 - -
Mepo1g03281 1149 MobiDBLite consensus disorder prediction 1115 1149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03281 Mepo-Chr1 37895596 37914845 Transposed