Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g03236 | ATGGCTTCGGAGAAGAAACTCTCGAACCCCATGAGGGATATCAAGGTTCAGAAACTTGTTCTTAATATTTCTGTTGGTGAAAGTGGCGATCGTCTCACCAGAGCTGCAAAGGTGTTGGAACAACTCAGTGGCCAAACCCCAGTGTTTTCCAAAGCACGATACACTGTCCGTTCTTTTGGTATTAGAAGAAATGAAAAGATTGCTTGCTATGTGACTGTTAGAGGCGACAAGGCAATGCAGCTTTTGGAGAGCGGTTTGAAGGTGAAGGAATATGAATTGCTGAGAAGAAATTTCAGTGATACTGGGTGTTTTGGATTCGGTATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCTTCAACCGGTATTTATGGTATGGACTTTTTCGTTGTTCTTGAGCGTCCTGGTTACCGTGTGGGACGTCGTCGTCGGTGCAAGGCTCGTGTTGGGATCCAACATCGGGTAACAAAGGATGATTCCATGAAGTGGTTCCAGGTGAAATATGAAGGTGTGATCCTCAACAAGTCACAGGCGATTGTTTAG | 546 | 0.4451 | MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDSMKWFQVKYEGVILNKSQAIV | 181 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g03236 | 181 | FunFam | 60S ribosomal protein L11 | 2 | 174 | - | - | |
Mepo1g03236 | 181 | ProSitePatterns | Ribosomal protein L5 signature. | 39 | 55 | IPR020929 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo1g03236 | 181 | Pfam | ribosomal L5P family C-terminus | 66 | 164 | IPR031309 | - | |
Mepo1g03236 | 181 | Pfam | Ribosomal protein L5 | 9 | 62 | IPR031310 | - | |
Mepo1g03236 | 181 | PIRSF | RPL5p_RPL5a_RPL11e_RPL5o | 1 | 172 | IPR002132 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo1g03236 | 181 | Gene3D | - | 2 | 177 | IPR022803 | - | |
Mepo1g03236 | 181 | SUPERFAMILY | RL5-like | 8 | 173 | IPR022803 | - | |
Mepo1g03236 | 181 | PANTHER | 60S RIBOSOMAL PROTEIN L11-RELATED | 2 | 176 | IPR002132 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g03236 | Mepo-Chr1 | 37191217 | 37194122 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g03236 | 1 | 181 | Cytoplasmic Ribosomal Protein Gene Family | AT2G42740 | 96.133 | 2.13e-130 | 361 |