Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03195 ATGCAAGTTTTTGTGGCAACATCATTGGACCTTATTAATTGGCTTCTTGGTTTGTTTGGTTCCTCTAAAAAGAAAGTACACATTTCTGATCATAGCAACAAAATTGATGTATCTTTGTCCCTCCCATTATGCATATTGTTGACAATTGTGATTGGTCTTGTGTTGTTGCACTTGTATCGGTTCGGTGAAAACAAAGAAATCAATTACAATACCAATGAGGTTGAAGAAGAGGAGTTGGAGCACACTGTCGATGAATCAGACCGTGATTTTGTCTGGGATTGGCAGCTTAGTCCCCGGACTTCTGAGCACGGTGGTGCTTCCAGCATACATGCTTCGTGTGCGTTTTGTGGCGATCTAAGCACCACAAGATGCGCTCGCTGCAAGGTTGCAAGATATTGCTCAGTAGAATGCCAAATTGGACATTGGAGGTCGAGGCATAAATATGAATGCTTTGAAATGGAGACCGAAGAAAGTCATGCAAGAGACGAAACCCCTATGGTTGTCGAGGAAAAGTATGATAATGTAAGCTCTACGAAGTGCTTGATCACGAACTGGAGATGGCATAAATATAACTGCATTGCAAGTGATGAGAGTTCAGCTCCAACAGAAAGACCTAATAGAAATGTTGAAGTGCTCAAGCATTCTAATAAAGAAGAAGAGAGTATTCCTTCATCTAAACCTCTCTATTTGGAGCTTCATCCAGAAGGAACCTCAAACTTCAAGTTTTCAACTGAAGTATCACAGGTTACTGCCAAGGAATGTCATGTGAATAAAACTCAATGGGTGAAATATCTTGAAGATGAACTTGTGATGTCTAGGAAAGAAACTTTCACAATAAAATCAGAGCGTGATGAATGGAAGAAGCGAGCAAATTTTGCTAGATCGGTGTTAAAAAGCTTCAAGGAAAAATCTGCGAACCAATTGTCTGTGTTGAGAAATGAAAATGAGAGCCTAAACAACTCGCAGATTGCAGCACAAGAAAACTTTGCAGAGAAGAGAAGGTTAGAAGAACATATACAAATGGTAGAGAGTGAATGTGCTACGCTGAAGAAGGAACTACAAGAAGAGCATAAACATGCTCAGTATCTTACACTAGAGTCTAACAAGAGTCACGAGACAGCGCAAATTGCCATAAGAGAAGTTGAAGTGTTAAGACAAGAGCTTCTAGAAGAGCGCAAACATGTCCAACGAGTTAAAGAGAATTTCATTAGAGAAGTTGCATTTGCTGAATCAAGAGCTATTTTTGCAGAGGCAAAACTCAGTGATCTTCAGAGGAAAATCAAACTGACAGATCATAAGGTTCTTGTCAAGACAGACAGTTTAGGCAAACCTTCCACGGCATGCACTATATGTTTGACCAATGAAAAGAACATGGCCTTTGGGTGTGGACACATGACATGCAGAGACTGTGGATCCCAATTATCAAAGTGTCCAATATGCCGTGAGCAGATCACAAGTCATATTAAATTGTTTCCTGGGTGA 1482 0.4028 MQVFVATSLDLINWLLGLFGSSKKKVHISDHSNKIDVSLSLPLCILLTIVIGLVLLHLYRFGENKEINYNTNEVEEEELEHTVDESDRDFVWDWQLSPRTSEHGGASSIHASCAFCGDLSTTRCARCKVARYCSVECQIGHWRSRHKYECFEMETEESHARDETPMVVEEKYDNVSSTKCLITNWRWHKYNCIASDESSAPTERPNRNVEVLKHSNKEEESIPSSKPLYLELHPEGTSNFKFSTEVSQVTAKECHVNKTQWVKYLEDELVMSRKETFTIKSERDEWKKRANFARSVLKSFKEKSANQLSVLRNENESLNNSQIAAQENFAEKRRLEEHIQMVESECATLKKELQEEHKHAQYLTLESNKSHETAQIAIREVEVLRQELLEERKHVQRVKENFIREVAFAESRAIFAEAKLSDLQRKIKLTDHKVLVKTDSLGKPSTACTICLTNEKNMAFGCGHMTCRDCGSQLSKCPICREQITSHIKLFPG 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03195 493 SUPERFAMILY RING/U-box 435 487 - -
Mepo1g03195 493 Pfam MYND finger 113 150 IPR002893 -
Mepo1g03195 493 Coils Coil 301 328 - -
Mepo1g03195 493 PANTHER CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING 224 491 - -
Mepo1g03195 493 Coils Coil 371 426 - -
Mepo1g03195 493 ProSiteProfiles Zinc finger MYND-type profile. 113 150 IPR002893 -
Mepo1g03195 493 SMART ring_2 448 480 IPR001841 -
Mepo1g03195 493 Gene3D - 99 156 - -
Mepo1g03195 493 Pfam Zinc finger, C3HC4 type (RING finger) 447 486 - -
Mepo1g03195 493 ProSiteProfiles Zinc finger RING-type profile. 448 481 IPR001841 -
Mepo1g03195 493 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 437 492 IPR013083 -
Mepo1g03195 493 SUPERFAMILY HIT/MYND zinc finger-like 110 153 - -
Mepo1g03195 493 Coils Coil 332 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03195 Mepo-Chr1 36596252 36603359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03195 113 150 Miscellaneous Gene Families AT4G31670 52.632 1.21e-07 52.4