Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03194 ATGGATCAAGATTGTTCCCTCAAATGCTTATTGGTAATGATAATACTCTTCGTAGGGTTTCTTGCTTGGCTAGAAAACAAAGTAGCAAACTCAAATGAAGCCAATAAACAAAGAGAGGAGGAGGTGGAAGTTAGTGATGAAACAAGCTTATTGTTTGAACAAGATGAAGAAGAGAACAAACTAAGTGAATATTGTGTTTGCTCCTTTTGTGGCAAATTCAGAAACATAATCACAAGATGCTCGGGATGCAAAAATGCTATATATTGCTCAAAAGCCTGCCATATCATGCATTGGAGATTTTGGCACAAAGACGAATGTGTTGAGATAGTGTCTGCAGAAGAACACGAGGAATCATCTTTTCATGCTGGAACCCAATGCTTTCTCTTGGAGCATGGAAACGAAAACCCTAAGTACTCATTCAATGATGATGATGATGATGAGCATAAAACATATGAGGGGGATGTTTACTATATTGAAGGAGGAGAAAATAGTGTTGTTGAGTCAATTAAAGAAACAGCAATAGGGCTTCAACATAGTGGCTGTGCAGTTTGTGGCAATCCATGTTCCCAAAAATGCTCAAGATGCAAAGCTATAAAATATTGCTCTCAAACATGCCAACATTTTGATTGGAAATTAGGGCATAAATTCCAATGTTGTGTTAAGAAGACAAGTTCAACTCAAGTAACAACGAGCAATCAAGAATGGCCTGCAGATGAAAATGTTATAATGCCTCCAAATCCAGATGAGGTGGTAGATAATGATCTTTCATATGACCCTCTTTGCTTGGAATTTTATTCAGAAGAAAACACCAACAACAAGGCTCTGATTTTAATTTCTCAGGAAGCTAACAACAAAGTCCAAGAAGTTGAGGAAGAAATGAGAAATCTAAAAGTAGAATTGGAAATGATCAGAAGTGAAAATATAACACTGCAATCAAAGCTTAACTATTGGGAAATTAGAGCAAAGAATTCCTCTAATAGACTTTACAGTTTCAAGAAAGAAAATGAACACCAGTTGTTTATTTTGAAGCATGAAAATGAATTGATATCGAATGCTGAGAAACAAGCTCGTCAAATGGTTACGAATTTATCTCAAAGGCTTCACTGTTTGCAGATTGCAATGGAAACTGGAGTAGCAGAGAGGAAAAAACAAGAAGAGTTTATACATGTGCTGCAGAATGAATGTACCAAGACTAAGAGAGAGTTTCACGAACAAAACAAGTATGCTGAAAGGCTTCGACAGAAGCTTGATAATGTAGCTCAATTTCCTATAAGAATGGCTGAAGAGACAAAACAAAAACTATCCATTCCTTCCAATGCAATTTTTGCTGATGAATCCAAGGCTGCTGTTGTTGAGGTGTACAAGACAATCAGTTTAAGCAGAAATCCAACCTTGACTAGTCAGTCTTGTACAATTTGCTTAAGCAATGAGAAGGACTTGGCCTTTGGTTGTGGACACATGACTTGCAGAGAGTGTGGATCGAAAATTCGCAAGTGTCATATATGTAGAAAGAAGATCACTGATCGTATTAGGTTGTTCCCTGGCTGA 1548 0.3714 MDQDCSLKCLLVMIILFVGFLAWLENKVANSNEANKQREEEVEVSDETSLLFEQDEEENKLSEYCVCSFCGKFRNIITRCSGCKNAIYCSKACHIMHWRFWHKDECVEIVSAEEHEESSFHAGTQCFLLEHGNENPKYSFNDDDDDEHKTYEGDVYYIEGGENSVVESIKETAIGLQHSGCAVCGNPCSQKCSRCKAIKYCSQTCQHFDWKLGHKFQCCVKKTSSTQVTTSNQEWPADENVIMPPNPDEVVDNDLSYDPLCLEFYSEENTNNKALILISQEANNKVQEVEEEMRNLKVELEMIRSENITLQSKLNYWEIRAKNSSNRLYSFKKENEHQLFILKHENELISNAEKQARQMVTNLSQRLHCLQIAMETGVAERKKQEEFIHVLQNECTKTKREFHEQNKYAERLRQKLDNVAQFPIRMAEETKQKLSIPSNAIFADESKAAVVEVYKTISLSRNPTLTSQSCTICLSNEKDLAFGCGHMTCRECGSKIRKCHICRKKITDRIRLFPG 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03194 515 SUPERFAMILY HIT/MYND zinc finger-like 64 108 - -
Mepo1g03194 515 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 459 514 IPR013083 -
Mepo1g03194 515 ProSiteProfiles Zinc finger MYND-type profile. 67 106 IPR002893 -
Mepo1g03194 515 Gene3D - 49 112 - -
Mepo1g03194 515 Gene3D - 165 224 - -
Mepo1g03194 515 Coils Coil 21 41 - -
Mepo1g03194 515 Coils Coil 272 313 - -
Mepo1g03194 515 PANTHER CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING 173 513 - -
Mepo1g03194 515 ProSiteProfiles Zinc finger RING-type profile. 470 503 IPR001841 -
Mepo1g03194 515 Pfam MYND finger 67 106 IPR002893 -
Mepo1g03194 515 Pfam MYND finger 181 218 IPR002893 -
Mepo1g03194 515 SUPERFAMILY HIT/MYND zinc finger-like 177 221 - -
Mepo1g03194 515 Coils Coil 342 362 - -
Mepo1g03194 515 ProSiteProfiles Zinc finger MYND-type profile. 181 218 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03194 Mepo-Chr1 36557664 36565291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03194 181 218 Miscellaneous Gene Families AT4G31670 55.263 1.89e-08 55.1