Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03160 ATGGCTCTCAAATTTCCAAACGCTTCAAACCCATTTCTTCTTTCATCATCACCACTAACCCCATCTCTTCAAAATCCTAACTTTTTCACGCTACGCTTCAGTAACCATCGCAGAAAGCTCAAGCTTCGAGCTTCATCTACAGGAGACCCAAATGGCGCTGATGGGTCATCTTGGTCAGAGTCGTTGGACCGCGCTTCGAGGCGGTTTTTGGTGAAATATAGGGATATGGTGAAGAAAGAGACAGGTGTTGATTTGGGAGATGGGGTTGGGAAGGTAGGTGAGTTTGTGGATGGTGTGAGGAAGGTTGGAAGTGAGTTGAGAACTCCGAGTTTGGATGAGTTTGTTGATTGGAACCGGTTCGAGAATTGGAAGAATGTCAAGAACTGGGAACCTAGGCGAATCGGTGCTTTAGTTCTGTATATATTTGTTGTAGCATTTGCTTGTCGAGGAGTATTTGTAGCAATTCAAGCACCTTTCCTAAACCGCCAGAGGAAAGAGTCGACTGAAGCCTACATGGAAGCGTTAATTCCTGAGCCATCCCCTACTAACATCAGAAGATTTAAGAAGGCTATGTGGAGAAAGACAATGCCAAAAGGCCTGAAAATTAAAAAGTTTATTGAGAGACCTGATGGAACACGTGTTCATGATTCCACTTTTGTTGGAGAGGATGCATGGGAGGATGATCAGGAATCTTCTGATGATCATGTAAAACAAATTGTTGGGGATGAAGAAAGGTTAAACAGTGAAGAGAAGAAAGAATTAACCAAAGACCTGGCCATCTCAGGCGAAGTTCAAACTGAGGGCACATGGCGTGAGAGACTTCATAAATGGAGGGAAATCCTTGGAAAAGAACGTCTTGTTGAGCAATTAAATTCGTTAGATGCCAAATATGAAGTTGATTTTGACATGAAAGAGGTTGAAAATAGTCTTCGCAAAGAAGTGGTAGAAAAGGTGACAACCACTCAGGGAACAAGGGCTCTGTGGATAGCTAAGAGATGGTGGAAATATCGTCCTAAACTTCCTTATAATTACTTTCTTGACAAACTTGATAGTTCGGAGGTAGAAGCTGTTATCTTTACCGAAGACATGAAAAGATTATATGTGACAATGAAAGAAGGCTTCCCATTGGAATATGTTGTTGATATTCCTCTTGATCCTTATCTTTTTGAGATTATTACGGCATCTGGAGTGGAAGTAGATATCCTTCAGAAGCAACAGATCCATTATTTTCTCAAGGTTGCGATTGCATTTTTACCTGGAATACTAATTCTAATTCTTATGAAGCAGTCTTTGGCCCTTCTGCACATCACTTCCAATCGTTTTCTTTACAAGAAGTATAATCAACTCTTCGATATGGTTTATGCCGAAAATTTCATTCTGCCAGTTGGAGATGTTGGTGAAACAAAATCTATGTCCAAGGAAGTTGTGTTGGGAGGTGATGTTTGGGATCTGCTTGATGAGTTGATGATCTATATGAGAAATCCTATGCAGTTCTATGAAAGGGATGTGAAGTTTGTTCGGGGTGTTCTACTCTCTGGACCTCCAGGAACAGGAAAAACACTTTTTGCAAGGACACTTGCAAAACAAAGTGGATTGCCTTTTATTTTTGCTTCTGGCGCTGAGTTCACAGATAGTGAAAAGAGTGGAGCAGCTAAGATTAATAAGATGTTCTCCCTTGCAAGGAGAAATGCACCTTGTTTTGTGTTTGTGGATGAAATAGATGCCATTGCTGGAAAACATACTAGGAAGGATCCACGTAGAAAGGCTACTTTTGAGGCTCTTATTACACAGCTTGATGGAGAGAAGGAAAAAACTGGTATTGACCGTGTATCCCTCAGACAAGCGGTCATATTTATCTGTGCCACAAATAGAGCAGATGAGTTAGATCTTGACTTTGTTCGACCTGGACGAATTGATCGTCGTCTATACATTGGTTTGCCTGATGCAAAACAAAGAATCAAAATTTTTGATGTTCATAGTTCTGGAAAGCAACTTGCAGACGATGTGAATTTCTCAAAGCTTGTCTTCCGTACTGTTGGATTCTCTGGAGCAGATGTTAGAAACCTTGTCAATGAAGCAGCGATAATGTCGGTGAGAAATGGGCATCCAAAAATATTCCAGCAAGACATTACCGATGTATTAGATAAACAACTGCTTGAGGGTATGGGTGTCCTTATCACCGAGGATGAGCAGAAGAAGTGTGAAGAAAGAGTATCTTTTGAAAAAAGGAGACTGCTTGCTGTACATGAAGCCGGTCATATTGTGCTTGCTCACTTGTTTCCTAGGTTTGATTTGCATGCATTTTCACAGCTCCTGCCCGGTGGTAAGGAAACTGCAATATCTGTTTTCAATCCTCGAGAAGATATGGTAAACCAAGGTTATACAACTTTTGGTTACTTGAAGATGAAAATGGTAGTTGCTCATGGCGGTCGATGTGCTGAACATGTTATATTTGGCGAGAATATTACTGATGGAGGAAGGGATGATCTCGAAAAGATAACAAAGATTGCTCGGGAGATGGTAATCAGCCCTCAAAATAAAAGGTTGGGGTTAATAGGTTTAACTAAAAGGGTTGGCTTAGCTGATCAACCAGATGCTTCAGATGATGATTTGATAAAATATAGATGGGATGATCCTCAAGTAGTTTCTACAAAGATGTCAGTGGAGTTATCTGAGCTCTTTACACGGGAGTTGACAAAGTACATTGAAGAAACCGAAGAACTTGCGATGAATGCTTTGAGGGATAATAAACACATCGTGGACATGGTTGCAAGAGAACTATTGGAGAAGTCAAGAATAACTGGATTTGAGATTGAAGAAAAAATGAAACAACTGTCTCCAGTAATGTTTGAGGACTTTCTGAAGCCATTCCAAGTAGACTTCGAAGTGGACGGACCATTGCCGCATAACGATCATATACACTATCGCACACCTGACTTACACCCGGCTCCTCTCCATAGATGTTAA 2967 0.4092 MALKFPNASNPFLLSSSPLTPSLQNPNFFTLRFSNHRRKLKLRASSTGDPNGADGSSWSESLDRASRRFLVKYRDMVKKETGVDLGDGVGKVGEFVDGVRKVGSELRTPSLDEFVDWNRFENWKNVKNWEPRRIGALVLYIFVVAFACRGVFVAIQAPFLNRQRKESTEAYMEALIPEPSPTNIRRFKKAMWRKTMPKGLKIKKFIERPDGTRVHDSTFVGEDAWEDDQESSDDHVKQIVGDEERLNSEEKKELTKDLAISGEVQTEGTWRERLHKWREILGKERLVEQLNSLDAKYEVDFDMKEVENSLRKEVVEKVTTTQGTRALWIAKRWWKYRPKLPYNYFLDKLDSSEVEAVIFTEDMKRLYVTMKEGFPLEYVVDIPLDPYLFEIITASGVEVDILQKQQIHYFLKVAIAFLPGILILILMKQSLALLHITSNRFLYKKYNQLFDMVYAENFILPVGDVGETKSMSKEVVLGGDVWDLLDELMIYMRNPMQFYERDVKFVRGVLLSGPPGTGKTLFARTLAKQSGLPFIFASGAEFTDSEKSGAAKINKMFSLARRNAPCFVFVDEIDAIAGKHTRKDPRRKATFEALITQLDGEKEKTGIDRVSLRQAVIFICATNRADELDLDFVRPGRIDRRLYIGLPDAKQRIKIFDVHSSGKQLADDVNFSKLVFRTVGFSGADVRNLVNEAAIMSVRNGHPKIFQQDITDVLDKQLLEGMGVLITEDEQKKCEERVSFEKRRLLAVHEAGHIVLAHLFPRFDLHAFSQLLPGGKETAISVFNPREDMVNQGYTTFGYLKMKMVVAHGGRCAEHVIFGENITDGGRDDLEKITKIAREMVISPQNKRLGLIGLTKRVGLADQPDASDDDLIKYRWDDPQVVSTKMSVELSELFTRELTKYIEETEELAMNALRDNKHIVDMVARELLEKSRITGFEIEEKMKQLSPVMFEDFLKPFQVDFEVDGPLPHNDHIHYRTPDLHPAPLHRC 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03160 988 FunFam ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 648 719 - -
Mepo1g03160 988 Pfam Peptidase family M41 738 939 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mepo1g03160 988 PANTHER ATP-DEPENDENT PROTEASE 128 946 - -
Mepo1g03160 988 SUPERFAMILY FtsH protease domain-like 741 952 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mepo1g03160 988 Pfam AAA+ lid domain 668 709 IPR041569 -
Mepo1g03160 988 Gene3D - 466 647 IPR027417 -
Mepo1g03160 988 Gene3D Peptidase M41 731 946 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mepo1g03160 988 Pfam ATPase family associated with various cellular activities (AAA) 509 645 IPR003959 GO:0005524|GO:0016887
Mepo1g03160 988 FunFam ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 462 647 - -
Mepo1g03160 988 Gene3D - 648 721 - -
Mepo1g03160 988 ProSiteProfiles PH domain profile. 1 67 IPR001849 -
Mepo1g03160 988 FunFam ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 731 946 - -
Mepo1g03160 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 473 716 IPR027417 -
Mepo1g03160 988 SMART AAA_5 505 648 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03160 Mepo-Chr1 36215470 36229287 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03160 1 36215470 36229287 Mepo1g03160 1 36215470 36229287 ECH