Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03120 ATGGCCACTATGTTAGACACCGGTAACCTGGTGATTCAACAACTTCACCCAAATGGGACAAAGAGTATATTATGGCAGAGTTTTGATTATCCCGGAGATACTTTGATCCCAACGATGAAGTTGGGATTTAATCGAAAAACAGGACATAATTGGTCATTGGTTTCATGGTTGACTCCTACGCTAGAAACTCCAGATAAGAAAAGTAAAAGAAAGGAAGGTAAGAGCAATGATTTGGCGGAATCCTATGATATCAAAGATCTTGAAAATGACTTCAAGGGACATGATATAAAAGTTTTTAATTATACATCAACTTTGGAAGCAACTATGGACTTTTCACCTGAAAACAAGTTAGGACAGGGAGGCTATGGGCCTGTTTATAAGGGAATCTTGACAACAGGGCAAGAAGTTGCTGTGAAAAGACTTTCAAAAACATCTGGAAAAGGAATTGTTGAATTCAAAAATGAATTGGTACTTATATGTGAACTTCAGCACACAAATCTTGTAACTACTTGTGGATACATGTCTCCAGAATATGCCATGGAAGGAGTTTGTTCTACAAAATCTGATGTCTATAGCTTTGGAGTGTTGCTGCTTGAAATTGTTTGTGGAAGAAAAAACAATAGCTTCTATGATGTTGATCGTCCACTAAATCTAATCGGACATGCATGGGAGCTATGGAATGATGGTGAGTATCTAAAGCTAATGGATCGAACATTAAATGACACATTTGTTCTTGATGAAGTGAAAAGGTGCATTCATGTTGGTCTCTTATGTGTAGAACAATATGCAAATGATCGACCTACAATGTCGGATGTGATATCAATGTTAGCAAACAAATATGAACTCACAACCTTACCAAGAAGACCAGCATTTTATGTTAGAAGAGGAATATTTGAGGGGGAAACAACTTCCAAAGGGGAAGACACATACACCTATTCTATGACAACAATTTCTACCTCATGTGAAGTAGAAGAGAAAATATAA 984 0.3689 MATMLDTGNLVIQQLHPNGTKSILWQSFDYPGDTLIPTMKLGFNRKTGHNWSLVSWLTPTLETPDKKSKRKEGKSNDLAESYDIKDLENDFKGHDIKVFNYTSTLEATMDFSPENKLGQGGYGPVYKGILTTGQEVAVKRLSKTSGKGIVEFKNELVLICELQHTNLVTTCGYMSPEYAMEGVCSTKSDVYSFGVLLLEIVCGRKNNSFYDVDRPLNLIGHAWELWNDGEYLKLMDRTLNDTFVLDEVKRCIHVGLLCVEQYANDRPTMSDVISMLANKYELTTLPRRPAFYVRRGIFEGETTSKGEDTYTYSMTTISTSCEVEEKI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03120 327 SMART serkin_6 111 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g03120 327 Gene3D Transferase(Phosphotransferase) domain 1 88 170 - -
Mepo1g03120 327 Pfam D-mannose binding lectin 1 56 IPR001480 -
Mepo1g03120 327 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 158 281 - -
Mepo1g03120 327 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 59 IPR036426 -
Mepo1g03120 327 SUPERFAMILY Protein kinase-like (PK-like) 97 293 IPR011009 -
Mepo1g03120 327 Pfam Protein tyrosine and serine/threonine kinase 172 276 IPR001245 GO:0004672|GO:0006468
Mepo1g03120 327 Gene3D Transferase(Phosphotransferase) domain 1 171 289 - -
Mepo1g03120 327 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 168 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03120 Mepo-Chr1 35383883 35389226 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03120 99 325 Receptor kinase-like Gene Family AT3G45860 35.510 1.53e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g03120 PK_Tyr_Ser-Thr 2.3e-08 CL0016