Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03111 ATGGCAACAAAACTAGTACCCAGTTTAGTTCATCCTTTGAAATCAAGGTTTTTCGGTAATACTCTTTTAACCAAACAATCTTTTCAACTTTATGGGGTTCAACCAAAGCTTTCATATTCTTCTTCTTCTAAGATAAGCATGAGTCTCAAAGCTGGTATTGTTGGTCTTCCTAATGTTGGCAAATCTACCCTCTTCAATGCCGTTGTTGAAAACGGAAAGGCTCAAGCTGCCAATTTTCCTTTTTGTACAATAGAGCCAAATGTAGGGATTGTTGCTGTTCCAGATTCTCGTCTCCAAGTGCTCTCTGATCTCAGTAAATCTCAGCGAATGGTTCCAGCATCCATAGAGTTTGTAGATATTGCTGGCCTTGTAAAGGGTGCAAGTCAAGGCGAGGGTCTTGGCAATAAGTTTTTATCACATATTCGTGAGGTGGACTCCATACTTCAGGTTGTACGATGTTTTGATGATAATGACATTATTCATGTGAACGGGAAAGTTGATCCCAAGTCTGATATTGACGTTATCAATTTGGAGCTTGTTTTCACAGACTTAGACCAGATTGAGAAAAGACTGGATAAACTAAAAAAGGGCAAGACAAAGGATTCACAATCTAAAGTCAAGGAAGAGGCAGAAAAGACTGCATTGGAAAAAATTCGTGTAGCACTCTTGGATGGAAAACCTGCACGATCTGTGACCTTAACAGATTTTGAGAGGGAATCTGTAAAGCAACTTTGCTTGCTCACCATGAAACCCATTATATATGTGGCAAATGTTGCGGAGTCCGATCTAGCTGATGCAACAAACAATGATTACGTTACAGGTGTCAAGAATGTTGCATCTGAGTTGCAGTCTGGAATTGTAACAATTTCAGCGCAGGTTGAGGCAGAGCTTTCTGAACTAGCGCTTGAGGAAAGACAAGAATATTTGAAATCTCTTGGTGTTAGTGAAAGTGGTCTTGGGAACCTAATTAGGGCAACATATGATCTTTTGGGGCTGCGAACTTATTTTACTTCCGGTGAGAAGGAGACAAAGGCATGGACAATACTTGCAGGAATGACTGCACCTCAAGCTGCTGGAGTTATTCATTCTGACTTTGAGAAGGGTTTCATCCGAGCAGAGACAGTGGCTTATGATGACTTTGTTGCTGCTGGTTCACTTGGTGCAGCACGAGAAAAAGGACTCTTGCGATCTGAAGGTAAAGACTACATTGTACAAGAAGGAGATGTAATGTTGTTTCGATTCAATGTATAA 1251 0.4069 MATKLVPSLVHPLKSRFFGNTLLTKQSFQLYGVQPKLSYSSSSKISMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLQVLSDLSKSQRMVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFDDNDIIHVNGKVDPKSDIDVINLELVFTDLDQIEKRLDKLKKGKTKDSQSKVKEEAEKTALEKIRVALLDGKPARSVTLTDFERESVKQLCLLTMKPIIYVANVAESDLADATNNDYVTGVKNVASELQSGIVTISAQVEAELSELALEERQEYLKSLGVSESGLGNLIRATYDLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAGSLGAAREKGLLRSEGKDYIVQEGDVMLFRFNV 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03111 416 PRINTS GTP1/OBG GTP-binding protein family signature 117 132 IPR006073 GO:0005525
Mepo1g03111 416 PRINTS GTP1/OBG GTP-binding protein family signature 51 71 IPR006073 GO:0005525
Mepo1g03111 416 PRINTS GTP1/OBG GTP-binding protein family signature 134 152 IPR006073 GO:0005525
Mepo1g03111 416 PRINTS GTP1/OBG GTP-binding protein family signature 73 91 IPR006073 GO:0005525
Mepo1g03111 416 Pfam Protein of unknown function (DUF933) 332 415 IPR013029 -
Mepo1g03111 416 FunFam Ribosome-binding ATPase YchF 160 250 - -
Mepo1g03111 416 Pfam 50S ribosome-binding GTPase 51 160 IPR006073 GO:0005525
Mepo1g03111 416 Hamap Ribosome-binding ATPase YchF [ychF]. 48 416 IPR004396 GO:0005524|GO:0005525|GO:0016887
Mepo1g03111 416 Gene3D - 49 331 IPR027417 -
Mepo1g03111 416 SUPERFAMILY TGS-like 332 413 IPR012676 -
Mepo1g03111 416 CDD TGS_YchF_OLA1 330 414 IPR013029 -
Mepo1g03111 416 PIRSF EngD 46 416 IPR004396 GO:0005524|GO:0005525|GO:0016887
Mepo1g03111 416 Gene3D - 160 250 IPR023192 -
Mepo1g03111 416 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 49 331 IPR031167 GO:0005525
Mepo1g03111 416 PANTHER OBG GTPASE FAMILY 41 415 - -
Mepo1g03111 416 Gene3D - 95 415 IPR012675 -
Mepo1g03111 416 NCBIfam redox-regulated ATPase YchF 47 416 IPR004396 GO:0005524|GO:0005525|GO:0016887
Mepo1g03111 416 FunFam Ribosome-binding ATPase YchF 319 415 - -
Mepo1g03111 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 354 IPR027417 -
Mepo1g03111 416 CDD YchF 51 330 IPR041706 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03111 Mepo-Chr1 35239886 35247514 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03111 1 35239886 35247514 Mepo1g03111 1 35239886 35247514 ECH