Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g03100 ATGACGGTCGATGCTCACCATCTCAACCTTTTTCCTTCTCAACTTCAACCCAATAGAGAAATGATGATGATGATGAACACGACCGACACAAATTTTACAAACATGTACAACAACTACTCATCATTGCTACCACTTTCCGGCACAACCACCGTGTCGGAAAATCTCATTCCGTCGCAATCTCCGTCGAACAATCCTTTCATAACCGATTTCCTCCGTCAAAAAATATCCACCGTGAAACCAGACACCATTTTCGCTTACAACAACAACGTTGTATCGTTCCCACAAAAACGTTCTAGAGATTCCATTAACAACTACCCTTTCATCAATGAAGATTTTTCTCAATACATCCACCATCAAAACACCGACATCGACAACTTCATTTCTCAACACACGGAGAAGTTTAGAGTGGAATTAGAAGAGAAAAGAAAGAGAGAAACAATGATGATAATGGAAGCAATAGAAACCGAAGTGATGAAAAAAATGAAAGCAAAAGAAGAAGAAATCCAAAAAATGGAAAGAATGAACATGATTCTTGAAGAAAAAGTGAAAACACTATGCATAGAGAATCAAATCTGGAGAGAGTTAGCACAAAACAATGAAGCAACCGCAAATGCTCTCAGAAACAATCTCCAACAAATCCTTATGCAACAAATGGAAAACAACAACCACAACAACGGCGACAACGGCGAAGGTGAATATAGCGGCGGTGGTGATTTTGCCGTTGCCGCCGATGCTGCGGTGGCGGAGGATGCTGAATCATGTTGCAGTAATGATGAATATTCCGGGTGGCGCAGGGTAGTAATGACGGCGCAGGATAAGGATGAAGGTAAAGTGATGAATAATAGATTATGCAGAAACTGTGGGGAAGGTGAATCTTGTGTATTGATCATGCCTTGTAGACACTTGTGTTTGTGTTCAATGTGTGGGGCTATGGTTCTTACTTGTCCTATATGTGATTCTGTTAAATCTGCTACTCTTAATGTTAATCTTGATTAA 996 0.4026 MTVDAHHLNLFPSQLQPNREMMMMMNTTDTNFTNMYNNYSSLLPLSGTTTVSENLIPSQSPSNNPFITDFLRQKISTVKPDTIFAYNNNVVSFPQKRSRDSINNYPFINEDFSQYIHHQNTDIDNFISQHTEKFRVELEEKRKRETMMIMEAIETEVMKKMKAKEEEIQKMERMNMILEEKVKTLCIENQIWRELAQNNEATANALRNNLQQILMQQMENNNHNNGDNGEGEYSGGGDFAVAADAAVAEDAESCCSNDEYSGWRRVVMTAQDKDEGKVMNNRLCRNCGEGESCVLIMPCRHLCLCSMCGAMVLTCPICDSVKSATLNVNLD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g03100 331 Coils Coil 154 188 - -
Mepo1g03100 331 Coils Coil 196 216 - -
Mepo1g03100 331 CDD mRING-HC-C3HC5_CGRF1-like 282 318 - -
Mepo1g03100 331 ProSiteProfiles Zinc finger RING-type profile. 284 319 IPR001841 -
Mepo1g03100 331 Pfam Zinc finger, C3HC4 type (RING finger) 281 320 - -
Mepo1g03100 331 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 88 328 IPR017066 -
Mepo1g03100 331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 329 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g03100 Mepo-Chr1 35110365 35111872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g03100 280 318 Miscellaneous Gene Families AT4G39050 41.026 3.15e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03100 1 35110365 35111872 Mepo1g03100 1 35110365 35111872 ECH