Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01973 ATGACATCTTCGGACTCCGGTGAAAGCCGCCGATCAACAAAACCTCAAATTCGCCCCGGTGCACCGGCACCGGAGCAAGAGAATCTCCCATGTCCACGTTGTGATTCAACAAACACTAAGTTTTGTTACTACAACAACTACAACTACTCTCAGCCACGTCATTTCTGCAAAGCTTGTCGCCGGTACTGGACTCACGGTGGTACCCTCCGTGACATCCCCGTCGGCGGTGGTACCAGAAAAAACGCCAAACGCTCTCGTACTAACCATGTTGCTGTCACTTCCTCATCTTCTTCCTCCGCTGTGACTTCAGCGGCCCCGGAGCATCACCATTATCAGTCAATGACACCCATCTCCGCCGTGCAAGGAGGTGGGTCTTTTCCATTTTCCGGCAATGTTGACGGTGATGGAAAACAGAACATGAGTGTTTGTGGGAGTTTCACTTCATTGCTGAACAACAACAACCAAAGCTCTGGGTTTCTGGCATTAGGTGGATTTGGGCTTGGGCTTGGACATGGGCTTGAAGAAATGGGGTTTGGGATTGGAAGAACAGGTTGGGCTTTTCCAGGAATGGTGGATGGATCAAACATTGGTGTTCCTGTTGTGTCTTCTGGTGTTGTTGGAAACACGTGGCAGTTAGAAGGTGGTGAAGGTGGTTTTGTTGGTGCTGGTGATTGTTTCTCTTGGCCTGGACTTGCAATTTCAACACCAGTAAATGGTCTCAAATGA 726 0.4945 MTSSDSGESRRSTKPQIRPGAPAPEQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGGTRKNAKRSRTNHVAVTSSSSSSAVTSAAPEHHHYQSMTPISAVQGGGSFPFSGNVDGDGKQNMSVCGSFTSLLNNNNQSSGFLALGGFGLGLGHGLEEMGFGIGRTGWAFPGMVDGSNIGVPVVSSGVVGNTWQLEGGEGGFVGAGDCFSWPGLAISTPVNGLK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01973 241 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 157 IPR045174 GO:0003700|GO:0006355
Mepo1g01973 241 ProSitePatterns Zinc finger Dof-type signature. 31 67 IPR003851 GO:0003677|GO:0006355
Mepo1g01973 241 MobiDBLite consensus disorder prediction 87 110 - -
Mepo1g01973 241 ProSiteProfiles Zinc finger Dof-type profile. 29 83 IPR003851 GO:0003677|GO:0006355
Mepo1g01973 241 MobiDBLite consensus disorder prediction 74 110 - -
Mepo1g01973 241 MobiDBLite consensus disorder prediction 1 30 - -
Mepo1g01973 241 Pfam Dof domain, zinc finger 27 83 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01973 Mepo-Chr1 20146878 20148260 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01973 1 241 C2C2-Dof Transcription Factor Family AT3G50410 48.289 1.47e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo1g01973 zf-Dof 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01973 - - cam:101488684 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01973 1 20146878 20148260 Mepo1g01973 1 20146878 20148260 ECH