Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01858 ATGGCATCAATTACCATAACCTCCTTGCTCTTCTTTTCCTTGATCACTTTGTCATTGGCAATGGACACGTCCATGCGTAGTAACGAGGAGGTTATGACCATGTACGAGGAATGGTTGGTAAAACACCATAAGGTGTATAATGGTTTAGGAGAGAAAGATCAAAGATTTGAAATTTTTAAGGATAATTTAGGATTCATCGATGAACACAATGCTCAAAATTACACATACAAAGTAGGGTTGAACAAGTTTGCTGATATGACTAATGATGAATATCGCAACATGTATTTGGGCACGAGGAATGATGCCAAAGGTAGGGTTATGAAAACCAAGATCACCACAGGTCACCGATATGCTTTTAATTCCGGTGATCGGTTGCCGGTGCATGTTGATTGGAGGTCGAAAGGTGCAGTTGCTCATATCAAAGATCAAGGAAGTTGTGGAAGTTGTTGGGCGTTCTCAACAATAGCAACAGTGGAAGCTATAAACAAAATAGTGACAGGGAAGCTTGTGTCTTTGTCAGAACAAGAGCTTGTTGATTGTGATAGAGCTTTCAATGAAGGGTGCAATGGTGGTCTCATGGACTATGCCTTTGAATTTATCGTTGAAAATGGTGGCATAGACACTGAACAAGACTATCCATACAAGGGATTTGAGGGTAGATGTGATCCAACAAGGAAAAATGCCAAGGTAGTGAGCATTGATGGATATGAAGATGTTCCAGCTTATAATGAAAATGCATTAAAGAAAGCTGTTTCTCATCAACCTGTGAGTGTTGCTATTGAGGCCGGTGGCAGGGCTTTGCAACTCTATCAATCGGGTGTATTTACTGGTAGATGTGGAACAAACTTGGATCATGGTGTGGTTGTTGTTGGATATGGTTCTGAAAACGGTGTTGATTATTGGTTAGTGAGGAACTCATGGGGCACAAACTGGGGTGAAGAAGGTTACTTCAAGCTAGAACGTAATGTGAAAAAGACCAATACAGGAAAGTGTGGAATTGCAATGCAAGCCTCATACCCAGTGAAGTATGGTCAAAACTCTGCTGAAGTGCTTGTTAGCAGTGCTTGA 1068 0.411 MASITITSLLFFSLITLSLAMDTSMRSNEEVMTMYEEWLVKHHKVYNGLGEKDQRFEIFKDNLGFIDEHNAQNYTYKVGLNKFADMTNDEYRNMYLGTRNDAKGRVMKTKITTGHRYAFNSGDRLPVHVDWRSKGAVAHIKDQGSCGSCWAFSTIATVEAINKIVTGKLVSLSEQELVDCDRAFNEGCNGGLMDYAFEFIVENGGIDTEQDYPYKGFEGRCDPTRKNAKVVSIDGYEDVPAYNENALKKAVSHQPVSVAIEAGGRALQLYQSGVFTGRCGTNLDHGVVVVGYGSENGVDYWLVRNSWGTNWGEEGYFKLERNVKKTNTGKCGIAMQASYPVKYGQNSAEVLVSSA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01858 355 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 143 154 IPR000169 -
Mepo1g01858 355 Pfam Cathepsin propeptide inhibitor domain (I29) 35 91 IPR013201 -
Mepo1g01858 355 CDD Peptidase_C1A 126 340 IPR039417 -
Mepo1g01858 355 PRINTS Papain cysteine protease (C1) family signature 300 306 IPR000668 GO:0006508|GO:0008234
Mepo1g01858 355 PRINTS Papain cysteine protease (C1) family signature 285 295 IPR000668 GO:0006508|GO:0008234
Mepo1g01858 355 PRINTS Papain cysteine protease (C1) family signature 143 158 IPR000668 GO:0006508|GO:0008234
Mepo1g01858 355 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 283 293 IPR025660 -
Mepo1g01858 355 Pfam Papain family cysteine protease 125 341 IPR000668 GO:0006508|GO:0008234
Mepo1g01858 355 Gene3D Cysteine proteinases 16 343 - -
Mepo1g01858 355 SMART Inhibitor_I29_2 35 91 IPR013201 -
Mepo1g01858 355 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 300 319 IPR025661 -
Mepo1g01858 355 SMART pept_c1 125 341 IPR000668 GO:0006508|GO:0008234
Mepo1g01858 355 SUPERFAMILY Cysteine proteinases 27 341 IPR038765 -
Mepo1g01858 355 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 26 340 IPR013128 GO:0008234
Mepo1g01858 355 FunFam Cysteine protease 1 14 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01858 Mepo-Chr1 18526028 18529420 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07160 3 85277481 85283316 Mepo1g01858 1 18526028 18529420 ECH
Mepo4g00300 4 4672144 4677071 Mepo1g01858 1 18526028 18529420 ECH
Mepo1g01858 1 18526028 18529420 Mepo1g01858 1 18526028 18529420 ECH