Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01221 ATGGTAAAGAAGATCTGTGGAATTGGAGCTGGATATGTAGGGGGTCCAACAATGGCTGTTATAGCCCTCAAATGTCCTTCAATTGAAGTAGCTGTGGTTGACATCTCTCACTCTCGCATATCAGCTTGGAACAGCGACAAACTCCCTATCTATGAGCCTGGCCTTGAAGAAGTTATACAACAATGCAGAGGAAAGAATCTCCTTTTCAGCACTGATATAGAAAAACATGTTTATGAAGCTGATATAATCTTTGTTAATGTTAACACACCAACAAAAACAAGTGGCCTTGGAGCTGGCAAAGCCGCAGATTTAACTTATTGGGAAAGTGCAGCGAGAATGATAGCCGATGTTTCAAGATCAAACAAAATTGTCGTTGAGAAATCAACTGTTCCAGTTAGAACAGCTGAAGTAATTGAAAAGATTCTAGTCCACAATAGCAATGGCATGATCAAGTATCAAATTTTGTCAAATCCTGAATTTCTTTCTGAAGGAACTTCCATTCAGGATCTTCTAAATCCTGATAGGGTTCTAATCGGAGGAAATGATAAGAATCTTGGAGGTCAAGAAGCTATTCAAAAATTGAAAGCTATATATGCTAATTGGGTTCCTGAAGATAGAATCATTACTACCAATCTTTGGTCTGCTGAACTCTCTAAGTTAGCTGATAATGCTTTTTTGGCTCAAAGGATTTCATCCATCAATGCCATGTCGGCTTTATGTGAGGCTACTGGTGCAGATGTTTCACAGGTTTCTTGTGTGTTAAGTAAAAACACTAAACTTGGTTCTAAATACTTAAATGCTAGTGTTGGTTTTGGTGGCTCGTGTTTTCAAAAAGATATACTTAACTTGGTTTATATATGTGAGAGTAATGGACTCATTGAGGTGGCTAATTATTGGAAAGAGGTAATCAAGGTGAATGATTACCAAAAGAGTAGGTTTGTGAAAAAAGTTGTGACATCTATGTTTAACACAGTTTCAGGTAAGAAGATTGCAGTTCTAGGATTTTCCTTCAAGAAAGACACTAGTGATACTAGAAAAACTCCTGCGATCGATGTTTGCAAAGGTCTTTTGGCAGATAACGCTTTCTTGAGCATTTACGACCCGCGGGTAAGTGAAGATCAGATTCGGACAGATTTGTCTACGAATGAGATTCGTTGGGACTGTTCAACTCAGGTGAAGCCAATGAGTTTTACTAGTGTGAAACAGGTTAGTGTTTTTGGGGATGTTTATGAGGCAACTAAAAATGCTCATGGGATATGTGTTCTTACTGAATGGGATGAGTTTAAGACAATTGATTATCAAAGAATATTTGATAGTATGGAGAAACCAGCATTTGTTTTTGATGGTAGAAATGTTTTGAATGTTGATAAGTTGAAGAAGATTGGATTTATTGTATACTCAATTGGGAAGCCAATAGACCAGTGGGTGGATCGCTAG 1437 0.3772 MVKKICGIGAGYVGGPTMAVIALKCPSIEVAVVDISHSRISAWNSDKLPIYEPGLEEVIQQCRGKNLLFSTDIEKHVYEADIIFVNVNTPTKTSGLGAGKAADLTYWESAARMIADVSRSNKIVVEKSTVPVRTAEVIEKILVHNSNGMIKYQILSNPEFLSEGTSIQDLLNPDRVLIGGNDKNLGGQEAIQKLKAIYANWVPEDRIITTNLWSAELSKLADNAFLAQRISSINAMSALCEATGADVSQVSCVLSKNTKLGSKYLNASVGFGGSCFQKDILNLVYICESNGLIEVANYWKEVIKVNDYQKSRFVKKVVTSMFNTVSGKKIAVLGFSFKKDTSDTRKTPAIDVCKGLLADNAFLSIYDPRVSEDQIRTDLSTNEIRWDCSTQVKPMSFTSVKQVSVFGDVYEATKNAHGICVLTEWDEFKTIDYQRIFDSMEKPAFVFDGRNVLNVDKLKKIGFIVYSIGKPIDQWVDR 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01221 478 Gene3D - 212 243 - -
Mepo1g01221 478 NCBIfam nucleotide sugar dehydrogenase 4 451 IPR017476 GO:0016616
Mepo1g01221 478 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 217 IPR036291 -
Mepo1g01221 478 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 331 454 IPR014027 GO:0016616|GO:0051287
Mepo1g01221 478 PIRSF UDPglc_GDPman_dh 3 470 IPR017476 GO:0016616
Mepo1g01221 478 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 3 474 IPR028356 GO:0003979
Mepo1g01221 478 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 186 IPR001732 GO:0016616|GO:0051287
Mepo1g01221 478 FunFam UDP-glucose 6-dehydrogenase 244 478 - -
Mepo1g01221 478 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 213 307 IPR014026 GO:0016616|GO:0051287
Mepo1g01221 478 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 213 312 IPR008927 -
Mepo1g01221 478 FunFam UDP-glucose 6-dehydrogenase 212 243 - -
Mepo1g01221 478 Gene3D - 244 477 - -
Mepo1g01221 478 PIRSF UDPglc_DH_euk 1 478 IPR028356 GO:0003979
Mepo1g01221 478 Gene3D - 1 211 - -
Mepo1g01221 478 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 316 466 IPR036220 -
Mepo1g01221 478 SMART UDPG_MGDP_dh_C_a_2_a 331 455 IPR014027 GO:0016616|GO:0051287
Mepo1g01221 478 FunFam UDP-glucose 6-dehydrogenase 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01221 Mepo-Chr1 11953710 11956936 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00244 3 3375747 3378733 Mepo1g01221 1 11953710 11956936 ECH
Mepo1g01221 1 11953710 11956936 Mepo1g01221 1 11953710 11956936 ECH