Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3798 ATGGATCCACCACTTATCTCCACCGCCGCAACCACCATTTCTGCTAACATCATACAACAAAATTACCCTGACTCTATAGAGTCTTTATCATCACCACCACCACAACCTGCACCGCGATCACGCGTTAATGAAACAATGAACGATGATCCCCTCCCTAATGTCCCCGGTGCCAAGCTTCGTCTAATGTGCAGCTACGGCGGCCACATAATGCCGCGTCCTCATGATAAATCCCTATGTTACGTTGGAGGTGACACTCGAATTGTGGTGATCGATCGCAGTTCTTCCCTGAAAGACCTTTGTTTTCGCCTTTCGAGAACAATTCTCAATGGAAGACCCTTTACTCTTAAGTATCAGCTTCCTAATGAAGACCTTGACAACCTCATCACAGTAACATCAGATGAAGATCTTGACAACATGATCGAAGAATATGATCGTATAACAGCTTCAGCTTCTACAATGAAACCTTCTTCTTCAAGACTCAGAGTGTTTCTGTTCTTCACAAAACCAGAGTCCACACTTTCAATGGGATCACTCCTTGATGATGCAAAATCTGAGACATGGTTTGTTGATGCACTCAACAACTCAGGGATTCTCTCAAGGGGTATGTCAGATTCAGCAGGAGAATCTTTTGTAAATCTTGATAATGTTCCTGCTAGTGATTCAAGCAACAACTTGGAATCTCAAGCAGAGTCATTGACTCTGCTTGAAAACAACAACAACAACAACAATAAAGTTAACAATGTTTTTGATGTTGTTAATGTTGTGAATTCAACACCTATTTTAGAGAATAGTTCTTCATCTTCTTCTTTGTCTCCTTCAATGGAGAATTTGCCACCGATTCGTGTTCGTGTTGATGAAAATGCTGGTAGGAGGCTTCAACAAGAGAATAAAGTTGGAATGAAGCAAGATGATGGTTTTGTAGTTTCTTCTGCTAATGTTGCTATGGCTGCAAATCCTGCAGCATTGAACATGGCTTCAGCTGGTGTGGTTACAACTACTACTGGTGGTGATGTGAATGTGAATAGGGTTGTTTCTGATGATGAAAGATCAGATTATGGAGCGACAATTGGATTGCGAAAACCGCCTTTACCATTGCAGCTTGTTCAACCAAGGACTAGTGGTGGTTTGAGTGTTCCTTCACCAGATTCAGTTACAAGTGATAGCAGTAGTATTGCATCTACAAATTCTTTCTCCAAAATTATTTATCATCAAGAACAAGTCCAAGGTTCAAATATAGAGACCAAACCTCAAGATTCTAGTTACATGTTACCACCACAATCGGATCCAAATCAACAACTTCAACAACCACCGCAACAACAACAATTTGTTCATCCCAACACTCACTATATCCACCACCCTACATCCACAAATCAAGTTCCAATTTCATCTTATTACCAAGTTTATCCCTCACCATCACAACAACAACTTCACCAACCAATTGGTCAACAACAACAATATCCAATTTATGTAATGCCTATGGGATCTACACAACAACCATACAACATGACATTGCAACATAATATAAATGACCCTAATGTGGTAGCTTCTAATAGGCCATTAATACCTCAAAGTGGAACTCCACCAATTTACCCTAATAAAGCACCTAACCCTAATGTGGCATCAAATTCAACATTTGTTCAAGTACCTTCAAATCAATTTCAACAACAATATGTTGGTATGCCTCAATTTCATCATCAACCACAACATCCTATTAATGTAGCTCCTTCTAGTGGTGCTAATTATGGTTATGAATATAGTGGTAATGTGGAAGGTCAAGTGTACTATACTCAACAACAAACTAATGCTCCATTGGTTACTCAATACCAATCCATGACTCCAGCAGCTGCTGCTGCAGCACTATCTGATGCTTCCCAACAATTTCCTGTCGATAATGTTCAGCAGCCGAATAGAACTTCACAGCCGATTTAA 1929 0.4007 MDPPLISTAATTISANIIQQNYPDSIESLSSPPPQPAPRSRVNETMNDDPLPNVPGAKLRLMCSYGGHIMPRPHDKSLCYVGGDTRIVVIDRSSSLKDLCFRLSRTILNGRPFTLKYQLPNEDLDNLITVTSDEDLDNMIEEYDRITASASTMKPSSSRLRVFLFFTKPESTLSMGSLLDDAKSETWFVDALNNSGILSRGMSDSAGESFVNLDNVPASDSSNNLESQAESLTLLENNNNNNNKVNNVFDVVNVVNSTPILENSSSSSSLSPSMENLPPIRVRVDENAGRRLQQENKVGMKQDDGFVVSSANVAMAANPAALNMASAGVVTTTTGGDVNVNRVVSDDERSDYGATIGLRKPPLPLQLVQPRTSGGLSVPSPDSVTSDSSSIASTNSFSKIIYHQEQVQGSNIETKPQDSSYMLPPQSDPNQQLQQPPQQQQFVHPNTHYIHHPTSTNQVPISSYYQVYPSPSQQQLHQPIGQQQQYPIYVMPMGSTQQPYNMTLQHNINDPNVVASNRPLIPQSGTPPIYPNKAPNPNVASNSTFVQVPSNQFQQQYVGMPQFHHQPQHPINVAPSSGANYGYEYSGNVEGQVYYTQQQTNAPLVTQYQSMTPAAAAAALSDASQQFPVDNVQQPNRTSQPI* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3798 642 CDD PB1_UP2 62 165 - -
Mal8g3798 642 Pfam PB1 domain 74 165 IPR000270 GO:0005515
Mal8g3798 642 MobiDBLite consensus disorder prediction 353 390 - -
Mal8g3798 642 MobiDBLite consensus disorder prediction 414 441 - -
Mal8g3798 642 PANTHER OS05G0427100 PROTEIN-RELATED 1 635 - -
Mal8g3798 642 SMART PB1_new 73 165 IPR000270 GO:0005515
Mal8g3798 642 MobiDBLite consensus disorder prediction 24 53 - -
Mal8g3798 642 ProSiteProfiles PB1 domain profile. 58 165 IPR000270 GO:0005515
Mal8g3798 642 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 635 - -
Mal8g3798 642 SUPERFAMILY CAD & PB1 domains 74 176 - -
Mal8g3798 642 MobiDBLite consensus disorder prediction 370 390 - -
Mal8g3798 642 Gene3D - 78 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3798 Mal-Chr8 110121960 110124528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3798 57 279 MAP Kinase Kinase Kinase AT1G79570 33.778 1.12e-25 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0381 5 5860048 5861872 Mal8g3798 8 110121960 110124528 ECH
Mal1g0414 1 4724638 4727205 Mal8g3798 8 110121960 110124528 ECH
Mal8g3798 8 110121960 110124528 Mal8g3798 8 110121960 110124528 ECH