Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5261 ATGATCACAGAGATGAAAGGAGATGCAGATGCAGGTGCCTTGGGAGCCAAGACAGCAAGAGCATGTGATAGCTGTTTAAGAAGAAGAGCACGTTGGTTTTGTGCTGCAGATGATGCTTTTCTTTGTCATGGTTGTGACAATTTGGTTCACTCTGCAAATCTATTAGCAAGTAGACATGAAAGGGTTCGTCTTCAAACCGCGTCTGCTAAGGTAACAACAACAGCACAAGCATGGCACAGTGGATTCACAAGAAAAGCAAGAACGCCGCGTCACAACAAAAATTCGTCGATTCAACAACAACAACAACGTCTTAAGGAAAAAGTTCTTTTCAATACTAGTTTTCTTCCACTTGTTCCTGAACTTGGAGGTGAAGAAGAACAAGGACAAGAGCTTCTTGTTGATATTGATGAGGTTGAGGAGGAGCAGTTGCTGTGTCGCGTACCGGTTTTTGATGTTGACCCTTTTGATTTAGAGACTTGTACTGTGAAAAATGATGGAGCTGATTTTGAAGAAATGTGTGATTTGGATAGTTTTTGTGAGTTTGATGTTGATCTTGCTGAATTTGCAGCTAATGTTGAAAGCTTACTTGGTGTTGGGAGTAGTGAGATTCAAGAGAATTCATCAGGACAAGTGTTTGATTATAAACAAGAGAATGAAATGGATGCATCCAAAAATGAAATGTTAAAGGTTAAGGATGAAGAACTTGATGATTTGGAATCAGTTTTTGATATGACAAGTGATGATGTTTTTCATTGGAATATTGATAATAATGATGTATCATTAGCACAACAAGAGAAAGAGTTTGTGCCTTTGAGTAATATTAGTGTTGGTGTTAGTAACAATAGTGTTACTAAAGAAGAAACAAAGAGAGAGAGATTTTTGAGACTAAACTATGAAGAGGTTATTACTGAATGGAGCAGGCAAGGTTCTCCTTCTCCATGGACTACTGGAAACCCTCCTAAGTTCAATTCTGATGATGATTGCTGGCAAAACATCTTGGGTTCAAGTGGTGTAGAAGGAGAAGTAAGAAGCTTAAGGGGGCAATTAATGGGAAGTAATGGAGATGGAGGAAGAGAAGCAAGAGTATCAAGGTACAGAGAGAAAAGAAGAACACGTTTGTTTGCAAAGAAGATAAGATATGAAGTAAGGAAATTGAATGCAGAGAAGAGACCTAGAATGAAAGGTCGTTTTGTTAAGAGGACATCATGTTTTGCTGGAGGAGCTACTTCTTTTACAACTAATTACCACTGA 1251 0.3845 MITEMKGDADAGALGAKTARACDSCLRRRARWFCAADDAFLCHGCDNLVHSANLLASRHERVRLQTASAKVTTTAQAWHSGFTRKARTPRHNKNSSIQQQQQRLKEKVLFNTSFLPLVPELGGEEEQGQELLVDIDEVEEEQLLCRVPVFDVDPFDLETCTVKNDGADFEEMCDLDSFCEFDVDLAEFAANVESLLGVGSSEIQENSSGQVFDYKQENEMDASKNEMLKVKDEELDDLESVFDMTSDDVFHWNIDNNDVSLAQQEKEFVPLSNISVGVSNNSVTKEETKRERFLRLNYEEVITEWSRQGSPSPWTTGNPPKFNSDDDCWQNILGSSGVEGEVRSLRGQLMGSNGDGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRTSCFAGGATSFTTNYH* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5261 416 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 406 - -
Mal7g5261 416 ProSiteProfiles Zinc finger B-box type profile. 17 64 IPR000315 GO:0008270
Mal7g5261 416 ProSiteProfiles CCT domain profile. 358 400 IPR010402 GO:0005515
Mal7g5261 416 Pfam B-box zinc finger 19 62 IPR000315 GO:0008270
Mal7g5261 416 SMART bboxneu5 17 64 IPR000315 GO:0008270
Mal7g5261 416 CDD Bbox1_BBX-like 21 64 - -
Mal7g5261 416 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 1 406 - -
Mal7g5261 416 Pfam CCT motif 358 400 IPR010402 GO:0005515
Mal7g5261 416 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5261 Mal-Chr7 121879751 121881237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5261 11 402 C2C2-CO-like Transcription Factor Family AT1G68520 43.897 2.68e-87 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mal7g5261 zf-B_box 4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5261 7 121879751 121881237 Mal7g5261 7 121879751 121881237 ECH