Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4045 ATGTTAGACAACACTGCTAATTCCTCTTCTGATGCTACTACTGCTTTTGCATCATTATCAGAAAATGGGGGTGCTAATAACAAAAGAAAAAGAAGACCAGCAGGCACACCAGATCCAGATGCTGAAGTTGTGTCTCTATCACCAAAAACTTTGTTAGAATCAGACAGATATGTTTGTGAGATCTGTAACCAAGGTTTTCAAAGAGACCAAAATCTTCAAATGCATAGGAGAAGACACAAAGTACCATGGAAATTATTGAAAAGAGAAACAACACAAGGTTTAAAGAAGAGAGTTTTTGTTTGTCCAGAACCAAGCTGTTTGCATCATGATCCATGTCATGCACTAGGTGACCTTGTTGGAATCAAGAAACATTTTAGAAGGAAACATAGTAATCATAAACAATGGGTTTGTGACAAATGCAACAAAGGTTATGCTGTTCAATCTGATTATAAAGCTCACATCAAAACATGTGGTACCAGAGGACATTCGTGTGATTGTGGTCGTGTGTTTTCCAGGGTGGAGAGTTTCATAGAACATCAAGACGCATGCACTATCAGAGGGAAGCACCAACCAGAGTTCCAAGCAACAACAATGCAACCTGCATGTTCTTCTAGAACAGCTTCAAGCACAAGTCCATCTAGTGAGGCAAATTTTAGTATATCAGCCCCATTACAAGGACTACCAGTACTTCCAAAACCATCTGATAAACCATTATCAGCACCTACCATATTAACTAGTTCAGATATGCACAATAAACCCTCAACCTCTTTTCACCATCATAACTTAGAACTTCAACTCTTACCTTCTTCAACAAACCATCAAGCAGAAAAACCAAATTCGAAGGATCAAAACTTCGAAACAACGCATTTGAAACTTTCAATAGGAAACAATGAATCAGAGAAACAAAGGAATGATGTTTCCACATTGGAACTAGCAAGGTTGAAGGAGTTTACCAGTGAGGAACTAAAATTGGCAATGGCAGAAAAGGCTTATGCAGAAGAAGCTAGAAAAGAAGCGAAACGTCAAATTGAGATAGCTGAAGTTGAGTTTGAGAATGCTAAAAGGATAAGAAAACAAGCACAAGATGAACTTGGAAAAGCTGAAGCTTTGAGAAAACAAGCTATTAAGAAGATAAGTAACACTGTTATGGAAGTAACATGCCAAGCTTGTAAGCAACAGTTTCAATCTTCAACTTCTGGTGTTCCATCAGAAGAAACATCCATTGTTATGGGTTACATGTCCTCCGCCACCACAGAAGGGGAAGCAGAATGA 1272 0.3844 MLDNTANSSSDATTAFASLSENGGANNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETTQGLKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCNKGYAVQSDYKAHIKTCGTRGHSCDCGRVFSRVESFIEHQDACTIRGKHQPEFQATTMQPACSSRTASSTSPSSEANFSISAPLQGLPVLPKPSDKPLSAPTILTSSDMHNKPSTSFHHHNLELQLLPSSTNHQAEKPNSKDQNFETTHLKLSIGNNESEKQRNDVSTLELARLKEFTSEELKLAMAEKAYAEEARKEAKRQIEIAEVEFENAKRIRKQAQDELGKAEALRKQAIKKISNTVMEVTCQACKQQFQSSTSGVPSEETSIVMGYMSSATTEGEAE* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4045 423 PANTHER ZINC FINGER PROTEIN SHOOT GRAVITROPISM 5 1 423 - -
Mal7g4045 423 MobiDBLite consensus disorder prediction 239 256 - -
Mal7g4045 423 MobiDBLite consensus disorder prediction 196 221 - -
Mal7g4045 423 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Mal7g4045 423 Pfam Zinc finger, C2H2 type 57 79 IPR013087 -
Mal7g4045 423 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 79 IPR013087 -
Mal7g4045 423 MobiDBLite consensus disorder prediction 1 24 - -
Mal7g4045 423 PANTHER OS03G0310200 PROTEIN 1 423 IPR039288 GO:0009630
Mal7g4045 423 SMART c2h2final6 135 162 IPR013087 -
Mal7g4045 423 SMART c2h2final6 99 129 IPR013087 -
Mal7g4045 423 SMART c2h2final6 57 79 IPR013087 -
Mal7g4045 423 Gene3D Classic Zinc Finger 35 100 - -
Mal7g4045 423 Coils Coil 322 377 - -
Mal7g4045 423 SUPERFAMILY beta-beta-alpha zinc fingers 56 155 IPR036236 -
Mal7g4045 423 MobiDBLite consensus disorder prediction 1 44 - -
Mal7g4045 423 MobiDBLite consensus disorder prediction 196 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4045 Mal-Chr7 106953694 106956456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4045 28 423 C2H2 Transcription Factor Family AT2G01940 58.838 1.41e-161 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g4045 zf-C2H2 0.0039 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4045 7 106953694 106956456 Mal7g4045 7 106953694 106956456 ECH