Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3986 ATGAGTAGTGGGAGGAACAAGATGGTTGCTCTATGGTTAATCACCGTTGCAGTAGGGTTAACATTAACTGAAGCTCAACCAGAAGTAAACTTCAAGTGTCTCTCAGAAAACGCCACGTGTCGTAGTTTAACCGACTACACCAACCCAAACACAACAACCTTGAAGGAAATCGCATCCCTGTTCAATGTAAAACACTTCCTAGACCTCTTAGGTGCTAACAACCTCCCAAGTGACACCAAAAACAGTTACACAGTCAAACCCAACCAAGTCATCAAGGTTCCATTCCCCTGTAAATGCAGCAACGAAACAGGTATATCGAACCATATACCGCGGTATACAATAAAACCGGGTGATGGGTTGGATGCAATAGCAAGGTATCGGTTTGCGGGTTTGGTGAAGTATCAACAGATCCAAACGGCGAATAAGATACCAGATGCTAATAATATAACTGCTGGTGCTACGATTTGGATTCCTCTGCCTTGTAGCTGTGATAAGGTGGATGGGAGCAGTGTGATGCATTATGCACATATTGTTGAAGCGGAGAGTAGTATTCAATCTATTGCTCAACAATATGGTACTAGTCAACAGACTCTTCTGTCAGTCAACGGTATTAATGACCCTAAAAAACTTCAAGCTGGTCAGCTTCTTGATGTTCCCCTTCCAGTTTGTAACTCGAGTATCAAAAGTGATTCATTGGATTTTCCGTTCCTTGTGCCAAATGCGACATATTTCTACACCGCAAATGAATGTGTCAAATGTAAATGCGACTCTACTGGTGGTAGCAACAACTTACAATGCGAGGCATCGAAACTAAAACCGATAAATGATTGGTCGGTTTGTCCTTCTATGCAATGCTCCGGGAGTGTGTTGCTTGGGAACACTACATCCACAGTGGCACCGAGTGGTGGTTCAGGTGATTCGGATTCAGGGGCATCTAGGAGCATGATGAATGGCTGGGTTTGGAATAAGCTTCTAATTCTCATTCACTTTCTCATCTTATTTGTGTATCTTTTGTAG 1017 0.4297 MSSGRNKMVALWLITVAVGLTLTEAQPEVNFKCLSENATCRSLTDYTNPNTTTLKEIASLFNVKHFLDLLGANNLPSDTKNSYTVKPNQVIKVPFPCKCSNETGISNHIPRYTIKPGDGLDAIARYRFAGLVKYQQIQTANKIPDANNITAGATIWIPLPCSCDKVDGSSVMHYAHIVEAESSIQSIAQQYGTSQQTLLSVNGINDPKKLQAGQLLDVPLPVCNSSIKSDSLDFPFLVPNATYFYTANECVKCKCDSTGGSNNLQCEASKLKPINDWSVCPSMQCSGSVLLGNTTSTVAPSGGSGDSDSGASRSMMNGWVWNKLLILIHFLILFVYLL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3986 338 CDD LysM 176 218 IPR018392 -
Mal7g3986 338 ProSiteProfiles LysM domain profile. 174 218 IPR018392 -
Mal7g3986 338 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 14 301 - -
Mal7g3986 338 ProSiteProfiles LysM domain profile. 110 157 IPR018392 -
Mal7g3986 338 SUPERFAMILY LysM domain 111 159 IPR036779 -
Mal7g3986 338 SUPERFAMILY LysM domain 174 220 IPR036779 -
Mal7g3986 338 SMART LysM_2 111 158 IPR018392 -
Mal7g3986 338 SMART LysM_2 175 219 IPR018392 -
Mal7g3986 338 SMART LysM_2 45 94 IPR018392 -
Mal7g3986 338 Gene3D LysM domain 167 231 IPR036779 -
Mal7g3986 338 Gene3D LysM domain 110 166 IPR036779 -
Mal7g3986 338 CDD LysM 112 157 IPR018392 -
Mal7g3986 338 Pfam LysM domain 176 219 IPR018392 -
Mal7g3986 338 Pfam LysM domain 112 158 IPR018392 -
Mal7g3986 338 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 14 301 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3986 13 290 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 48.571 1.89e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3986 - - cam:101506878 475.707