Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3537 ATGTTTGGTAACTGTGTTGATGAGAAAACAGTAATCACTTGTAACAAATTGACACAGGCTGAGATAGATGATCATAAGGTTTCAATGGCTTCTTCAAGTGGTGGTAATAATAGGGTTATGGAAAAACCAGGTCAAGAGCTTCTTCAACAACAACAACAAGCTTTAAGGTGTCCACGTTGTGACTCATCAAACACCAAATTCTGTTACTACAACAACTACAGTTTATCACAACCAAGACACTTCTGCAAAGCTTGTAAAAGATATTGGACAAGAGGTGGAACACTTAGAAACGTTCCTGTTGGTGGTGGTTGCAGAAAAAACAAACGTCTTAAACGACCAAATCACTCTTCTTCAAACATTGATACTACTACTACTACTACTGCTGGTTCTCCTTCTTCTTCAACTCCTACTAGTGCTAATTCAAACCCTCCTTCTCAACAACAACACCCCCATAGTTTTGATATTGCTTCTACCTCAAACCATATCAATTCTCTCCTTTATGGTAACTCTTCTTGTCATGATGTCATGAACTTTCCTTTTGCAACAAGGTTTAATTCTACTAGAGTTTCTTCAAGTTCTGTTTCTGGTTATGATCATCTTCAGCAGAATAATGGTCTTGGATTAGGCTTTTCATCTGGGATATTAATGTCTGGTGGTGGAGGAGAAGTTAATCTTAATCATCATCATCATGATGATGGTAATTACAGATCAAATGGTTTTGGTACTTCAAATAATAACAATTACAGTTCCATCTTTGGTTCTTCTTCTACTTCCATGGCATCTACTACTCCAGTTATGGCTTCTCTACTTAACTCTACACTACTGCAACAGAAATTCATGAGTACTGGTGGTGGAATGAAAGGTGGTGATCCTTTTCATCATGAGGCTGGGATAATGGATTCAAAAGAAGTGAAACTAGGTGAAGGACTACAAAATAGGTTGGATCAGTGGAGTAATAATATGAATATGAATGGTAATGGTGGTGTTGTTTTTCAAAACCAGATGGAAAATATGGGTTTGTCTGATAATTCTTCTTCTCTTTATTGGAATAATAGCAACAACAACAACAACAACACAACAGCAACAGGTTTGAGTAGTGTTTGGAGTACTGATCATCAACCTAATAATCTTGGTCCTAATTCAGTTACTTCTCTGATCTAG 1161 0.3695 MFGNCVDEKTVITCNKLTQAEIDDHKVSMASSSGGNNRVMEKPGQELLQQQQQALRCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLKRPNHSSSNIDTTTTTTAGSPSSSTPTSANSNPPSQQQHPHSFDIASTSNHINSLLYGNSSCHDVMNFPFATRFNSTRVSSSSVSGYDHLQQNNGLGLGFSSGILMSGGGGEVNLNHHHHDDGNYRSNGFGTSNNNNYSSIFGSSSTSMASTTPVMASLLNSTLLQQKFMSTGGGMKGGDPFHHEAGIMDSKEVKLGEGLQNRLDQWSNNMNMNGNGGVVFQNQMENMGLSDNSSSLYWNNSNNNNNNTTATGLSSVWSTDHQPNNLGPNSVTSLI* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3537 386 ProSitePatterns Zinc finger Dof-type signature. 57 93 IPR003851 GO:0003677|GO:0006355
Mal7g3537 386 MobiDBLite consensus disorder prediction 346 386 - -
Mal7g3537 386 ProSiteProfiles Zinc finger Dof-type profile. 55 109 IPR003851 GO:0003677|GO:0006355
Mal7g3537 386 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 358 IPR045174 GO:0003700|GO:0006355
Mal7g3537 386 MobiDBLite consensus disorder prediction 100 153 - -
Mal7g3537 386 MobiDBLite consensus disorder prediction 116 153 - -
Mal7g3537 386 Pfam Dof domain, zinc finger 53 109 IPR003851 GO:0003677|GO:0006355
Mal7g3537 386 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 13 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3537 Mal-Chr7 100498281 100499640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3537 24 116 C2C2-Dof Transcription Factor Family AT5G65590 62.366 2.48e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal7g3537 zf-Dof 3.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3537 - - cam:101512658 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3537 7 100498281 100499640 Mal7g3537 7 100498281 100499640 ECH