Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3338 ATGCAAGGTCAAAGGAGGACTATTGGGTCCTTCCCAGCAATTGTTAACATGATGCAAGGGCCTAGTTCTAATGGCACTGATATGAATCGTCAATCTTCCTTGAGTCATGTGCAAAATGCAGTAGATTTCCGGCTGTCAGATTATAGGGGTTCTTCTGGTGAGACTGCGTGCTTACGTGGTACTGGTCCTAATGTGAGCTTTAATGGCTGGAATACCAGTGAACCCAGTTCTGGACTGAATCCGGTCTACCAAGTCAACGATGATGGTCTAAAATCAGAACATAGGTTGTCTTCTTCATGTAGTGGTATTGCTGAGGATGGTCTAATGCCCGACGAAAGACAATTACTTGGGAGCCAATCCAGAATTCATCCCTCCTTTTTGCAAGGCTCCAGCTCTAGTCATACAACCCAGGGTATTAATTTCAGTATGGAGCACATTGCTAACTCTTCTGATCGAGGGAAGGGTAAAGAAACTGGTAGCGGTGTTAATAACAACGATCCTTTTGGATTAGATAGAGAGAAGACATCAACTGGCAGTTCTTCATTCAATCATATAGGAGCTTCGTCAGCAAGCTCTGGGTACATGGCTTGGGGAGATAGTGGCAGTTCAAGTTCTTCTTTAGGTAATTGGGGTCCTTCCTGCAAGAGAAAGGCCCTTGAAGATAGCTCTATGCAACTGTGTACTGGAGGAAGCTCGAGTTCCCTTGTACAATCTGAAAATGGTTACTGGCTTACTGATTCTGTTGATCTTAATGTTCCTGGAAGCTTAGGTGATTTGTCACCTTTAGAGGATTTCCGTGTTACTAGCCCTCCATTTCAGCAGAATACAAGAAATGAAGTGAGACAAGAAGCTTCCAATGCGTTTCCTTCAATGGTAAGTATTGCGGAAAATGTGGAAAGGCCTGTACGAAACTTTGATAGGAGAATGACCCATCTACATCATCCGGAATCTGTACCTCTCAATTTAACATCAACAGGGAGTGCTAGACATCATAATTACCCTTCTCCGCATCAAATACCCGGCTCTCTCTCATTTAATGAGTCCCTGGATTTAAGGTTAGCAGCTGGAGTAACAGCTGCAAATTCTGCTGTGCCGCAAAACCAGTCACCTTCGCTGCACATGCATCCTTTTCCGTGGAATAGAGCTGCTAATCCTAGAGTGGCGAGATCTTCAAGCTCTTATAGCTCAGGAGAAAGAGTACGGGAAGATTTTAATTTAAGAATCTTCCCAAGAGATAGCACCGAGCATCCCATGAACATGCCTGCTTCTTCAGGACATGAACCTGCAGGTTGGTATGCATCTTCTAGTAATGTGAACAATGCTGGAAGCATACCTCCTCCATCCTGGATTGGATCTAGTTCAAATGTCCACTCGTTACCGAATCCCAGCTGGACTTTTAACCATGAAGTCCCAACAGAAAATCTACAGAGAGTTTCAGAGTTCAGTCCTTGGTCCCTTTTTCCTTCAATCAGCTCAGCATCTGGTACTCATAATGGCCATTCCTCCTCTACTTCCGGCCCTCCTTCATTTTCTCTGGGTTCTAGCAGCAATCAAGCACATCCAAGAACATCATATTTGACGGAAAGAAGGGGTGGTGATGTTCTCTCTGCTCCTCATTCACTGCGAACATTACCCTTTGACAATGATGGGAGACGCCGGCTCATATCTGAGATTCGCCAAGTCCTGCTAGCAATGCGGAGGGGTGAGAACTTACGAGCTGAGGATTATATGCTCTTTGACCCTTTCCTATATCATGGCATGGCTGAAATGCACGACAGACACAGAGAAATGCGCCTTGACGTTGATAACATGTCTTATGAGGAATTGTTGGCATTGGAGGAGCGTATAGGAGACGTAAGCACTGGACTGAGTGAGGATATAATTAATAAGTTGATGAAACAGCGATTTTACATGTCTCTCATGACAGAGTCTTCTTCTTCTGATCTCGAACCTTGCTGTATCTGTCAGGAGGAATATGCTGATGGACAGAATCTCGGCTTGCTAGATTGTGGGCACGAGTTCCACAGTGACTGCATCACACAGTGGCTAATGCAGAAGAATCTGTGCCCAATTTGCAAAACAACGGCCTTGGCAACGTGA 2100 0.449 MQGQRRTIGSFPAIVNMMQGPSSNGTDMNRQSSLSHVQNAVDFRLSDYRGSSGETACLRGTGPNVSFNGWNTSEPSSGLNPVYQVNDDGLKSEHRLSSSCSGIAEDGLMPDERQLLGSQSRIHPSFLQGSSSSHTTQGINFSMEHIANSSDRGKGKETGSGVNNNDPFGLDREKTSTGSSSFNHIGASSASSGYMAWGDSGSSSSSLGNWGPSCKRKALEDSSMQLCTGGSSSSLVQSENGYWLTDSVDLNVPGSLGDLSPLEDFRVTSPPFQQNTRNEVRQEASNAFPSMVSIAENVERPVRNFDRRMTHLHHPESVPLNLTSTGSARHHNYPSPHQIPGSLSFNESLDLRLAAGVTAANSAVPQNQSPSLHMHPFPWNRAANPRVARSSSSYSSGERVREDFNLRIFPRDSTEHPMNMPASSGHEPAGWYASSSNVNNAGSIPPPSWIGSSSNVHSLPNPSWTFNHEVPTENLQRVSEFSPWSLFPSISSASGTHNGHSSSTSGPPSFSLGSSSNQAHPRTSYLTERRGGDVLSAPHSLRTLPFDNDGRRRLISEIRQVLLAMRRGENLRAEDYMLFDPFLYHGMAEMHDRHREMRLDVDNMSYEELLALEERIGDVSTGLSEDIINKLMKQRFYMSLMTESSSSDLEPCCICQEEYADGQNLGLLDCGHEFHSDCITQWLMQKNLCPICKTTALAT* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3338 699 CDD RING-H2_TTC3 651 693 - -
Mal7g3338 699 Pfam Ring finger domain 652 693 IPR001841 -
Mal7g3338 699 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 2 699 IPR045191 GO:0061630
Mal7g3338 699 SUPERFAMILY RING/U-box 631 696 - -
Mal7g3338 699 MobiDBLite consensus disorder prediction 492 524 - -
Mal7g3338 699 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 613 697 IPR013083 -
Mal7g3338 699 ProSiteProfiles Zinc finger RING-type profile. 652 693 IPR001841 -
Mal7g3338 699 SMART ring_2 652 692 IPR001841 -
Mal7g3338 699 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 2 699 - -
Mal7g3338 699 MobiDBLite consensus disorder prediction 411 433 - -
Mal7g3338 699 MobiDBLite consensus disorder prediction 148 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3338 Mal-Chr7 98096817 98099879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3338 15 699 C3H Transcription Factor Family AT2G15530 36.942 2.39e-108 342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3338 7 98096817 98099879 Mal7g3338 7 98096817 98099879 ECH
Mal1g5759 1 134672560 134676637 Mal7g3338 7 98096817 98099879 ECH