Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3149 ATGTCAGAGGTTAAAGATCCTGCGATAAAGCTATTTGGAAGGACAATTCCGCTTCCTCTGATCATCCCTACCAATGACTCTTCATCTCCCTCTTCTTCTCCGCCAGAATTCACCTCTGCAATACAACATGAAACACAGGAACCATCGAGGAAAGAACCCACCACAGCACAAGATGATGATGCCTCACATCAAACCACAGAAGATTTAAAATCTCTCACAACATCTTCTGTCATACTTGAGAATCCTCCCAAGACTCCATCAGCCGACACCGAGAATTCACTACTGAAATCTTCTACAAATGGAGAACAAAGCGAGACTAGTGTTTCTGAAGAAAAAACTCTGAAGAAACCCGACAAAATAATTCCATGCCCACGATGCAATAGCATGGATACTAAATTTTGTTACTTCAACAATTACAATGTCAATCAGCCCCGTCATTTTTGCAAGAAATGTCAAAGATATTGGACTGCAGGAGGAACAATGAGAAATGTTCCTGTTGGCGCTGGTCGCCGCAAGAACAAGAACTTATCTACCTCGCATTATCGACACTTGATAATTCCGGAGGCAGCTAAACTTAACTCGCCTAACGGATTACACAGTTTGAGAAATGGAGCAGCTGTCTTGGCGTTTGATTCAGATTTGCCGCTTTGTAACACCATGGCTTCTGTATTAAACATCGCTGAAAGAACACAAAACTGTGAGTCAAATGGTTTTCATCATGCAAGTTCATATGGCGGGGATGACAATCACTCGATTGGAGTTTCAGTTACAGCTTCAAATTCATCAGAAATGAAAGGTCAAATCAACACAAATGGGTCAGTGGATAAACGAGTTGAAGGTTTCCCTCCTCAATTGCAACATATTCCAAGGCCCTTTTTGCCTTATCCATGGAATTCTGCAATGCCTCCTCCTACATTTTGTCCACCAAACTATCCATTAGCATTCTATACTCCAGTAACCCCACCTGCATATTGGGGTTGTGTGCCACCTCCATGGAATATATCATGTATCTCACCAGAAAGTGCTTCTGCTAACCACAGTGACTCTGCTCATAGTTCTGTCCCAACTTTGGGGAAGCACTCAAGGGATGGAAACATCATTACCTCAATCAATTCACCGAAAGAAAAACGTGATAATGAACACAATAGTACCGAAAGCAGCGTTTTAATCCCAAAAACACTTAGATTTGATGACCCAAGTGAAGCTGCAAAGAGTTCATTATGGTCAAAGCTTGGGATCAATAATGACAAAGCCAATGCTCTCAATGGAGGAGGCATGTTCAATGGATTTCAATCCAAGGGAAAGGACATGAATCACTCAGTTGAAACGTCACCCCTGATGTATGCCAACCCTGCAGCTTTGTCGCGGTCTCGTAATTTCCATGAGGAAACCTAA 1395 0.4237 MSEVKDPAIKLFGRTIPLPLIIPTNDSSSPSSSPPEFTSAIQHETQEPSRKEPTTAQDDDASHQTTEDLKSLTTSSVILENPPKTPSADTENSLLKSSTNGEQSETSVSEEKTLKKPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKNLSTSHYRHLIIPEAAKLNSPNGLHSLRNGAAVLAFDSDLPLCNTMASVLNIAERTQNCESNGFHHASSYGGDDNHSIGVSVTASNSSEMKGQINTNGSVDKRVEGFPPQLQHIPRPFLPYPWNSAMPPPTFCPPNYPLAFYTPVTPPAYWGCVPPPWNISCISPESASANHSDSAHSSVPTLGKHSRDGNIITSINSPKEKRDNEHNSTESSVLIPKTLRFDDPSEAAKSSLWSKLGINNDKANALNGGGMFNGFQSKGKDMNHSVETSPLMYANPAALSRSRNFHEET* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3149 464 MobiDBLite consensus disorder prediction 67 107 - -
Mal7g3149 464 PANTHER CYCLIC DOF FACTOR 2 1 464 IPR045174 GO:0003700|GO:0006355
Mal7g3149 464 MobiDBLite consensus disorder prediction 21 44 - -
Mal7g3149 464 MobiDBLite consensus disorder prediction 340 386 - -
Mal7g3149 464 MobiDBLite consensus disorder prediction 45 66 - -
Mal7g3149 464 Pfam Dof domain, zinc finger 119 175 IPR003851 GO:0003677|GO:0006355
Mal7g3149 464 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 464 - -
Mal7g3149 464 MobiDBLite consensus disorder prediction 340 372 - -
Mal7g3149 464 ProSitePatterns Zinc finger Dof-type signature. 123 159 IPR003851 GO:0003677|GO:0006355
Mal7g3149 464 ProSiteProfiles Zinc finger Dof-type profile. 121 175 IPR003851 GO:0003677|GO:0006355
Mal7g3149 464 MobiDBLite consensus disorder prediction 14 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3149 Mal-Chr7 95344459 95347126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3149 1 463 C2C2-Dof Transcription Factor Family AT3G47500 41.057 5.52e-87 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal7g3149 zf-Dof 9.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3149 - - gmx:100813315 560.066