Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2160 ATGGGGATGGATTCTTCTAGTGGACAACACCAGCAATTGTCTAACCAGTCATTGGAGAGCATGTTAACATGTTCAAAAGCAGAACAAGACAAAAAGCCAAAACCTCAACCAGAAGCTCAAAAATGTCCAAGATGTGACTCAAACAACACCAAATTTTGTTACTACAACAATTACAGTCTTTCTCAACCAAGATATTTCTGCAAGTCTTGTAGGAGATATTGGACTAAAGGAGGTACACTAAGAAATGTTCCTGTTGGTGGGGGGTGTAGAAAGAACAAAAGATCATCATCAAAGAGATCTCAAGATCAACCATTTCAAACCAATCCAAATCCACTTACTTGTTTCCCTTCATTGTCTTATGATTCCAATGATCTCACACTAGCAATAGCTAGGCTTCAAAAGGGTCATCTTGGATTTGATCATGAACATGATTTTTCAATTTTAGGAAACCACACTAACACTTCATGTGGTATTCTTAACAATCATGGTATGAACCATTCCTCAAACAATCAAGGATTCTTTGAAGCACTTATGGGATCTCAAAACAATGTGCAAAATCTTTACTACATGGGGGAAGTGGATAATGGCAATGCTAATGGTGAGATGATGCTACCTTATGATCATGAAATGAGCATTGCAACAACTCAAGCAGTTACAGTTACTACTATGAAACAAGAAATGTGTAATGTTAGGGAACAAAATGAAAATAGGGTGTTGTTGGGTTTTCCATGGCAATTCAATAATGGTGACACAAATATGGCTGAAATTGATCATTCAGGAAGAGGTGGTTGGAATGGTCTCACTTCATCTTGGCATGGCCTTCTCAATAGCCCCCTAATGTAG 843 0.3796 MGMDSSSGQHQQLSNQSLESMLTCSKAEQDKKPKPQPEAQKCPRCDSNNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSKRSQDQPFQTNPNPLTCFPSLSYDSNDLTLAIARLQKGHLGFDHEHDFSILGNHTNTSCGILNNHGMNHSSNNQGFFEALMGSQNNVQNLYYMGEVDNGNANGEMMLPYDHEMSIATTQAVTVTTMKQEMCNVREQNENRVLLGFPWQFNNGDTNMAEIDHSGRGGWNGLTSSWHGLLNSPLM* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2160 280 MobiDBLite consensus disorder prediction 1 24 - -
Mal7g2160 280 MobiDBLite consensus disorder prediction 25 39 - -
Mal7g2160 280 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Mal7g2160 280 MobiDBLite consensus disorder prediction 85 110 - -
Mal7g2160 280 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 9 279 - -
Mal7g2160 280 MobiDBLite consensus disorder prediction 1 42 - -
Mal7g2160 280 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 279 IPR045174 GO:0003700|GO:0006355
Mal7g2160 280 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Mal7g2160 280 Pfam Dof domain, zinc finger 39 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2160 Mal-Chr7 77181266 77182764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2160 10 280 C2C2-Dof Transcription Factor Family AT2G28510 41.935 3.60e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal7g2160 zf-Dof 3.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2160 - - gmx:100799737 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2160 7 77181266 77182764 Mal7g2160 7 77181266 77182764 ECH
Mal4g0728 4 8084418 8086213 Mal7g2160 7 77181266 77182764 PCT