Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4316 ATGCGAATCAGTTGTAATGGATGCAGAGTTTTAAGAAAAGGGTGTAGTGAAGATTGTTGCATAAGACCATGTTTGGAATGGATCAAGTGTCCTCAATCACAAGCTAACGCAACTGTTTTTCTTGCTAAGTTTTATGGTCGTGCTGGTCTCATCAATCTCATCAATTCTGGCTCTGAAAATCTTCGTCCAGCAATTTTTCGTTCATTGCTCTATGAGGCTTGTGGGAGAATCGTGAACCCGATTTACGGTTCAGTGGGTCTATTATGGTCTGGAAGCTGGCAGCTCTGTCAAGCCGCTGTGGAAGCCGTTTTAAAGGGTGAGCCGATCAAGCCGATAGCTTCAGAGACTGCAGAAAATGGGCAGGGCCCACCGTTCAAGGCCTATGACATACGCCATGTGTCGAAAGATGATAACTCGGAGGAGACTAAGCAAGTCAGGACTCGGTCCCGATTTAGACGATCTGTGAGACCGAGGCCTATCAAGGAAACCGGTTCATCTAAAGAGGTGAACCGGTCAAAACCTTTTGTGGAAGTTGGTTCAGATGAAGAGGTGAACCGGTCTGAATTGTCGCTGAGCCAACTTGGTAAAGAGAGTGAAAGTGGGGTTTCGGTGGAAACTTCGATTCTTTTTCATGATGAACCGGAGTCGAAAGCTAAGGTAAGTGGTCGAGCTGAGGAAGGTGTGAGTGATGAGGTTGGCTTGGAGCTGCGGCTTGGGATCGAACCGGTATCACGTGAGGAGCACGTGGTTCCCATAAAGAAGAGGAAAATTGTGTTGAAGGATTGTAATGTTTCTTGCAAGGTGGAGCTTGGGTTTAAGCTTTCGGATTGA 831 0.4681 MRISCNGCRVLRKGCSEDCCIRPCLEWIKCPQSQANATVFLAKFYGRAGLINLINSGSENLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGEPIKPIASETAENGQGPPFKAYDIRHVSKDDNSEETKQVRTRSRFRRSVRPRPIKETGSSKEVNRSKPFVEVGSDEEVNRSELSLSQLGKESESGVSVETSILFHDEPESKAKVSGRAEEGVSDEVGLELRLGIEPVSREEHVVPIKKRKIVLKDCNVSCKVELGFKLSD* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4316 276 MobiDBLite consensus disorder prediction 129 148 - -
Mal6g4316 276 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 272 - -
Mal6g4316 276 MobiDBLite consensus disorder prediction 156 181 - -
Mal6g4316 276 PIRSF AS2 1 276 IPR017414 -
Mal6g4316 276 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 272 - -
Mal6g4316 276 MobiDBLite consensus disorder prediction 114 181 - -
Mal6g4316 276 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Mal6g4316 276 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4316 Mal-Chr6 123867587 123869005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4316 1 270 AS2 family AT3G02550 56.159 1.07e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal6g4316 LOB 1.8e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4316 6 123867587 123869005 Mal6g4316 6 123867587 123869005 ECH
Mal1g0336 1 3715565 3716749 Mal6g4316 6 123867587 123869005 ECH