Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4084 ATGGATCCAAACCAACCAAGAGAAGAAGATCTTGTCAACAACTTCAGGAGAAAACAATATAAGGAAATTGTTGAGACTAATGATTTCAATAATCATAGTTTATCTATCTCTGCAGTTGAAAAGATAATGAAGGAGGAAATTAAAGATGTTAAGCTGCAATCAAATGAGCCTTGTGTTCTTATGGCCAAAGCAGGTGAGTGGTTCATTGAGGAGATGACTATGAGATCTCGTTTCAAAATGGAACAAGATGGAAGTACAACACTTGACGTCAAGGACGTGGTCGATGCCTTTAATGATTTTGTTTCAGAGGCTCAAAAGATGAAGGAGAAAACCCAAGTTTCTCCAAATGAAGATGATTGA 360 0.3694 MDPNQPREEDLVNNFRRKQYKEIVETNDFNNHSLSISAVEKIMKEEIKDVKLQSNEPCVLMAKAGEWFIEEMTMRSRFKMEQDGSTTLDVKDVVDAFNDFVSEAQKMKEKTQVSPNEDD* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4084 119 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 98 - -
Mal6g4084 119 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 7 98 IPR027170 GO:0003700|GO:0006355|GO:0016602
Mal6g4084 119 SUPERFAMILY Histone-fold 13 98 IPR009072 GO:0046982
Mal6g4084 119 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 34 95 IPR003958 -
Mal6g4084 119 Gene3D Histone, subunit A 2 111 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4084 14 96 CCAAT-HAP5 Transcription Factor Family AT1G54830 42.169 1.43e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4084 - K20283 scan:103823806 38.1206